ggKbase home page

L3_106_000M1_scaffold_3778_11

Organism: dasL3_106_000M1_metabat_metabat_47_fa_fa

near complete RP 45 / 55 BSCG 49 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(7611..8105)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Clostridium sp. CAG:505 RepID=R7B7P4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.3
  • Coverage: 157.0
  • Bit_score: 184
  • Evalue 7.80e-44
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 157.0
  • Bit_score: 184
  • Evalue 1.10e-43
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 49.1
  • Coverage: 161.0
  • Bit_score: 157
  • Evalue 1.70e-36

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:505 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 495
ATGAAGGAGGAGTTGCGCGAACAAATTGTTAGCTATTTGCTGGAAAATCAGGATAAATTTTACCGGCTTGCCTTTTCCTATGTCCATAATGCGGATGCAGCCCTCGATATTGTACAGAATGCGATTGTCAAGGCATTGGAGCATTATACCTCGATTCGCAACGCCGACTATGTGAAGACCTGGTTCTACCGGGTTTTGGTCAATGAATGCTTAACCGCGCTGCAGAAGGGAAAACGGGAATATTCCTATGAGCCAGAGGATTTGCAGCGCATTCAAGATACGCCGGTGGAGGAAGACCACCAGGCGATGGAAATTTATGAACAGGTGCAAAAGCTCCCGGAAAAGATGAAAACCGTAGTGGTCCTGCGTTTTTATGAGGATTTCTCCTTGGCAGAGATCGCCAAGGTAACGGGGGCGAAGCTTAGCACAGTGAAATACCGTCTCTATTCGGCGCTGAAACAAATCAAGATGACTTACGAGGAGGGATTGGCATGA
PROTEIN sequence
Length: 165
MKEELREQIVSYLLENQDKFYRLAFSYVHNADAALDIVQNAIVKALEHYTSIRNADYVKTWFYRVLVNECLTALQKGKREYSYEPEDLQRIQDTPVEEDHQAMEIYEQVQKLPEKMKTVVVLRFYEDFSLAEIAKVTGAKLSTVKYRLYSALKQIKMTYEEGLA*