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L3_114_000G1_scaffold_3915_12

Organism: dasL3_114_000G1_concoct_111_fa

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 14 / 38
Location: 13260..13853

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Actinomyces sp. oral taxon 181 str. F0379 PF41_9ACTO">RepID=L1PF41_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 387
  • Evalue 5.60e-105
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1127690 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 181 str. F0379.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 197.0
  • Bit_score: 387
  • Evalue 7.80e-105
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.1
  • Coverage: 187.0
  • Bit_score: 240
  • Evalue 3.10e-61

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Taxonomy

Actinomyces sp. oral taxon 181 → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 594
ATGAGTGATACACAAGAAATCAGTCAAGAGGAAAAGGATCGGCTTTTTGCCGAGCAAGCCCTACCTCTGGTCGATCAGCTCTTCGGTGCGGCACTGGGCATGACGCGCAATCGCGCCGACGCAGAAGATCTCGTTCAAGAGACCTTTATGAAGGCCTACACGAAGTTCCACCAATATCAGCAAGGAACGAACATCAAGGCCTGGCTGTATCGGATTTTGACGAACACGTACATTACCCAGTACCGCAAGGCGCAGCGTTCGCCACAGCGTAGCGGTGGTGAAGACGTTGAAGACTGGCAGTTGGCAGCGGCTGCCTCACACGACGAAAAGGGGCTTGTCTCGGCGGAAGCCGAAGCTCTGGATAATATTCCGTCAGCTGAGCTTCGTTCGGCTCTTGAGGCTTTGTCTGAAGATCAGCGTGTGGTCGTACTTCTATCTGATGTTGAGGGTTTTGCCTATAAAGAAATTGCCGAGATGCTTGACATTCCGATTGGGACTGTCATGTCACGGCTTCATCGTGGGCGAAAGAATCTTCGCGACAGCCTATCTGAACTTGCGGCGGAATACGGTATTGGGGGACACCATGCAGATTGA
PROTEIN sequence
Length: 198
MSDTQEISQEEKDRLFAEQALPLVDQLFGAALGMTRNRADAEDLVQETFMKAYTKFHQYQQGTNIKAWLYRILTNTYITQYRKAQRSPQRSGGEDVEDWQLAAAASHDEKGLVSAEAEALDNIPSAELRSALEALSEDQRVVVLLSDVEGFAYKEIAEMLDIPIGTVMSRLHRGRKNLRDSLSELAAEYGIGGHHAD*