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L3_114_000G1_scaffold_78_16

Organism: dasL3_114_000G1_concoct_74_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 12238..13044

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2KWE9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 263.0
  • Bit_score: 400
  • Evalue 8.60e-109
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.6
  • Coverage: 263.0
  • Bit_score: 400
  • Evalue 1.20e-108
RNA polymerase sigma-32 subunit RpoH similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 262.0
  • Bit_score: 144
  • Evalue 4.10e-32

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGCAGCAAACACAAACCAGATGTCAGACCGTGACCGATCATCCGGAGAGCAACGAAAGCCTATGTGTCCGGGTACAGCAGGGCGACGCACAGGCGAAACTCCAGCTGCTGAAACAAAACGAGGGCATGATACACACCATTGCCTGGCGGGAGCGCCGGCGGTATGCCTATCTTTCTCTGGAACTGGAAGATCTCTGGGCAGCCGGACAGATGGGGCTGCTCCGTGCGGCGAGACTGTACCGCCCGGAGACCGGAAACCGTTTCGCCACATACGCCTGGTCACATATCCGGCAGGCAGTGCAGCGTGAAATTATCTGCGGCGGCACGATCGTGCGGATTCCGGTGCATCTTCACGACCGAATGCACAAGCTTTCCGTCTATCGGGAACCCGGCACAGCGGTCAGCTATGATGCGCTGTCCAGACGGGTGGCTGCCGAAGAGAAAAACGGCAAGACCATCAATGAGACTGAGATCAAGGAGATCCTTTGCAAGGTCGAGCCTATGGTCTCGCTGCGCAGTCTGAATGAGACCATGAAGCTGGACGGAGAGACCGAGCGGCAGGAAATGGTGACAGATCCGGAGATACCAACACCAGATGAAGAAGTGGGCGACCGTCTCTTTCTGGCGTCCTGCCTGGAACAGCTGACACCCCGAGAACGGCAAGTGATCGCCATGCGCTACGGCTTGGAGAACTGTGAAAGGATGACGCTGATGGAGATCGGCGGAAAACTGCACATCACCAAAGAGCGTGTGCGCCAGCTGGAACAGCGTGCCATGGAAAAAATGCGTGCATTCAGCCGTAGCTGA
PROTEIN sequence
Length: 269
MQQTQTRCQTVTDHPESNESLCVRVQQGDAQAKLQLLKQNEGMIHTIAWRERRRYAYLSLELEDLWAAGQMGLLRAARLYRPETGNRFATYAWSHIRQAVQREIICGGTIVRIPVHLHDRMHKLSVYREPGTAVSYDALSRRVAAEEKNGKTINETEIKEILCKVEPMVSLRSLNETMKLDGETERQEMVTDPEIPTPDEEVGDRLFLASCLEQLTPRERQVIAMRYGLENCERMTLMEIGGKLHITKERVRQLEQRAMEKMRAFSRS*