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L3_114_000G1_scaffold_78_19

Organism: dasL3_114_000G1_concoct_74_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 13954..14619

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase sigma-F factor n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2MBD0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.6
  • Coverage: 221.0
  • Bit_score: 397
  • Evalue 6.00e-108
Putative RNA polymerase sigma-F factor {ECO:0000313|EMBL:ERJ96593.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.6
  • Coverage: 221.0
  • Bit_score: 397
  • Evalue 8.50e-108
sigF; RNA polymerase sigma-F factor similarity KEGG
DB: KEGG
  • Identity: 62.7
  • Coverage: 220.0
  • Bit_score: 265
  • Evalue 1.30e-68

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Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGCCGGGTGAAGTGACCGCACCCCGTGCCGAAGAGCATCTGGGACTGGTGCATCTCTGCGCCAATCGTTTCCGCAACCGGGGAATCGAGTATGACGAATTGTACTCTGCCGGCTGTGTGGGACTGCTGAAAGCGATCAAGGCTTTTGACTGCGGCCGTGGGGTGCAGTTTTCCACTTATGCTGTCCCGGTGATCCTGGGTGAGATCAAGCGCCTGTTCCGGGACGGCGGCATTGTCCACGTGAGCCGCAGCCTCCGGGAACGTGCCATGAAACTGCAAAAGCTCCAGGAAGAGTTTGAACAGCGCTATGGCAGATCGCCCACCATGACCGAACTAAGCGAGCGCAGCGGTGAGTCCATCGAAGCGTGCGGCGAGGCGCTGTGCGTCACACAGACGCCACTTTCCCTCACCCGAAACGAGGACGACGAGGAGGACGGACAGTTCGACATCCCGGTAGAGGCACCGGACAGGCAGATCGGTGACCTGCTGTCACTGCGGCAGCTTATGGGCGCACTGCCGGAAAAAGACCGGATGCTCCTGGAGCTGCGCTATTTTCGGGAACTGACCCAGAGCAAGACCGCAGCCATCCTGGGCATGACGCAGGTGCAGGTCTCACGCCGGGAGAAAAAACTATTGACACAACTGCGGCAGGAACTGCTGTCGTAG
PROTEIN sequence
Length: 222
MPGEVTAPRAEEHLGLVHLCANRFRNRGIEYDELYSAGCVGLLKAIKAFDCGRGVQFSTYAVPVILGEIKRLFRDGGIVHVSRSLRERAMKLQKLQEEFEQRYGRSPTMTELSERSGESIEACGEALCVTQTPLSLTRNEDDEEDGQFDIPVEAPDRQIGDLLSLRQLMGALPEKDRMLLELRYFRELTQSKTAAILGMTQVQVSRREKKLLTQLRQELLS*