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L3_114_000G1_scaffold_118_5

Organism: dasL3_114_000G1_concoct_74_fa

near complete RP 49 / 55 BSCG 50 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 3543..4085

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Ruminococcus flavefaciens RepID=UPI0001C37E82 similarity UNIREF
DB: UNIREF100
  • Identity: 40.6
  • Coverage: 187.0
  • Bit_score: 136
  • Evalue 1.60e-29
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:EOS22351.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 120.0
  • Bit_score: 60
  • Evalue 1.50e-06
DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog similarity KEGG
DB: KEGG
  • Identity: 33.1
  • Coverage: 142.0
  • Bit_score: 59
  • Evalue 9.00e-07

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Taxonomy

Lachnospiraceae bacterium A4 → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 543
ATGGATCGAAGATTCAAGAAAATAGAAATGTCCGATGTCAAAGAAATCGTTGCGAAAAAGGGATTTTACTATCTCCCGTTGTGCAGAGTTTATGATGCTTTCTGTGGATGCAGATACATAATCGTTACTGAAGATTCTAATTTTGTAGTGAAAAATCCTAGGTTTGCAAACGAAATTATTATGACATCGGAGGAATTTGAACCGTATGCGGAAATATTTAATGCATACTTTGCCAATGAGGACAGAGAAAGAAAACGGCAGCAGCTTCATACTGACGAAGGATACACAGAAGATGAAGAATCTAATTTGAAAATATCTAATATCGATTGGAATCCGGTGGAAAACACAGTGCTTGCCAATTTGCAAAATGAGCAGATATGTCTTGCTTTGGAGCAACTCACGGAAACACAGAGAAAACGTGTAGAACTGTTTTACCTGTATGGCTGGACGGAGCGTCAAATTGCTGAGTACGAGGGTGTGAACAGATATGCTGTCAGAAAGTCATTAGACCAGTCAATCAAAAAACTAAAAAAATTTTTGTAA
PROTEIN sequence
Length: 181
MDRRFKKIEMSDVKEIVAKKGFYYLPLCRVYDAFCGCRYIIVTEDSNFVVKNPRFANEIIMTSEEFEPYAEIFNAYFANEDRERKRQQLHTDEGYTEDEESNLKISNIDWNPVENTVLANLQNEQICLALEQLTETQRKRVELFYLYGWTERQIAEYEGVNRYAVRKSLDQSIKKLKKFL*