ggKbase home page

L3_114_000M1_scaffold_1641_1

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: 2..1546

Top 3 Functional Annotations

Value Algorithm Source
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.1
  • Coverage: 514.0
  • Bit_score: 986
  • Evalue 9.90e-285
Elongation factor 4 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PN65_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 95.1
  • Coverage: 514.0
  • Bit_score: 986
  • Evalue 7.10e-285
GTP-binding protein LepA similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 514.0
  • Bit_score: 900
  • Evalue 1.40e-259

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1545
GAAGTCAGCCGCAGTCTGGCCGCCTGCGAGGGCGCAGTCCTCGTCGTCGACGCCAGCCAGGGCGTTGAGGCGCAGACGCTGGCGAACTGCTATCTGGCGCTGGACCACAATCTGGAGGTCGTGCCGATTTTGAACAAGATCGACCTGCCCAGTGCCGACCCTGACGCCGTGGCGAAGGAGGTCGAGGACGTCATCGGCCTGCCCTGCATGGAGGCACCGCGCGTCTCGGCCAAGCTGGGCATCGGCGTCAAAGAGGTGCTGGAAAGCGTTGCGCGGGATATCCCCGCCCCCACCGGCGACCCCGACGCACCGCTGAAGGCGCTGATCTTCGACTCCATCTACGACAGCTACAAGGGCGTCATCGTCTACGTCCGCATCTTTGAGGGCACGGTCAAGCCCGGCGACACCATCCGCCTGATGAGTACCGGCGCGGAGTTCCAGCTGGTGGAGGTCGGCCACATGGGCGCGACGAGCCTGACCCCCTGTGACAAGCTCGAGGCCGGTGAGGTCGGCTACCTGACAGCCAGCATCAAGACCGTGCGCGACACTCGCGTCGGCGATACCGTCACGCTGGCCGCCAACCCCACACCGGAGCCGATGCCCGGCTTCCGCACGGTCACGCCGATGGTGTTCTGCGGCATTTATCCCGCCGACGGCGCGGACTATCCCGACCTGAAGGACGCGCTGGAGAAATTGCAGCTCAATGACGCGAGCCTGACCTTTGAGCCGGAGACGAGTGCCGCGCTGGGCTTCGGCTTCCGCTGCGGTTTTCTGGGCCTGCTCCACATGGAGATCATCACCGAGCGTCTTGAGCGCGAGTTTGACCTTGACCTTATCACGACGACGCCGGGCGTCCAGTACCGCCTGACGCTGACCGACGGCACGGTGGAGGTCATTGACAACCCCTCCGCCTACCCCGACCCGACCCGCATCGTCAAGCAGGAGGAGCCGTTCGTCAACGCGCACATCTACACGCCGAACGATTACGTCGGCCCGCTGATGGACCTGTGCCAGACGAAGCGCGGCGTGCTGGTCGACATGAAGTATATGGACGAAACGCGCGTTGACCTGCATTACCTGATTCCGCTGGGCGAGATCGTCTACGACTTCTTTGATGCCATCAAGTCCCGCAGCCGCGGCTATGCCAGCTACGACTACGAGTGGGAGGGCTGGCACGAGAGCAAGCTCGTCCGTCTGGACTTTTTGCTCAACGGCGAGGTCGTCGATGCCCTGTCGATGATCGTCTTTGCAGACAACGCCTACGCGAAGGGCCGCCGCATCTGCGAAAAGCTGAAGGAGAACATCCCCCGCGCGCTGTTTGAGATCCCGGTGCAGGCGGCTGTGGGCGGCAAGGTCATTGCCCGCGAGACAGTCAAGGCCATGCGCAAGGACGTGCTGGCCAAGTGCTACGGCGGTGACATCACCCGTAAGAAGAAGCTGCTGGAAAAGCAGAAGGAAGGCAAAAAGAAGATGCGCCAGCTGGGCAGCGTGACCCTGCCGAGCGAGGCGTTTACCGCGGTGCTGAAGCTGGATTCGGATTCTTAA
PROTEIN sequence
Length: 515
EVSRSLAACEGAVLVVDASQGVEAQTLANCYLALDHNLEVVPILNKIDLPSADPDAVAKEVEDVIGLPCMEAPRVSAKLGIGVKEVLESVARDIPAPTGDPDAPLKALIFDSIYDSYKGVIVYVRIFEGTVKPGDTIRLMSTGAEFQLVEVGHMGATSLTPCDKLEAGEVGYLTASIKTVRDTRVGDTVTLAANPTPEPMPGFRTVTPMVFCGIYPADGADYPDLKDALEKLQLNDASLTFEPETSAALGFGFRCGFLGLLHMEIITERLEREFDLDLITTTPGVQYRLTLTDGTVEVIDNPSAYPDPTRIVKQEEPFVNAHIYTPNDYVGPLMDLCQTKRGVLVDMKYMDETRVDLHYLIPLGEIVYDFFDAIKSRSRGYASYDYEWEGWHESKLVRLDFLLNGEVVDALSMIVFADNAYAKGRRICEKLKENIPRALFEIPVQAAVGGKVIARETVKAMRKDVLAKCYGGDITRKKKLLEKQKEGKKKMRQLGSVTLPSEAFTAVLKLDSDS*