ggKbase home page

L3_114_000M1_scaffold_1998_1

Organism: dasL3_114_000M1_concoct_0_fa

near complete RP 48 / 55 BSCG 48 / 51 MC: 1 ASCG 12 / 38
Location: comp(40..705)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231299}; EC=3.1.26.3 {ECO:0000256|HAMAP-Rule:MF_00104, ECO:0000256|SAAS:SAAS00231445};; Ribonuclease III {ECO:0000256|HAMAP-Rule:MF_00104}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.4
  • Coverage: 220.0
  • Bit_score: 377
  • Evalue 1.20e-101
RNAse III (EC:3.1.26.3) similarity KEGG
DB: KEGG
  • Identity: 71.0
  • Coverage: 221.0
  • Bit_score: 298
  • Evalue 8.30e-79
Ribonuclease 3 n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PPW2_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 220.0
  • Bit_score: 377
  • Evalue 8.40e-102

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Subdoligranulum variabile → Subdoligranulum → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 666
ATGGCTCACAAACCGGAAGAACTGCAGGAGGTCCTGCACTATACATTCAAAAATCCTGCGCTGCTGCGCATTGCGCTGACCCATACCAGCTATGCCAACGAGAGCAAGGTCGCCACGACCCACAATGAGCGGCTGGAATTTCTGGGCGACAGCGTGCTGTCCGTCGTTGTAGCGGACTACCTGTTCCACCAGTCGGGCCGCCCCGAGGGCGAGCTGACCCGTATGCGCGCCAGCCTCGTCAGCGAGGATGCACTGTTCCAGTTCGCACAGGAAATTCAGCTGGGTGAGTATCTGCGCCTTGGCCACGGCGAGGACCTTGGCGGCGGACGCAGCCGCCCGAGCGTCGTCTCCGATGCGTTCGAGGCGGTCATTGCCGCGCTGTATCTGGACGGCGGCATGGAGGCCGCGCGCAATTTCATCCTGCCCTTCATCACCGAGGGCAAGACTGCCGAGGACGACTACAAGACCCGTCTGCAGGAGGTCGTCCAGCAGGACCCGTCCGCTGTGCTGAAATATGAGGTCACCGGCGAGACCGGCCCCGACCACAACAAGCAGTTTACGGTCTGCGTCTGGCGCAACGGCGAGCTGCTGGCCGAGGGCCGTGGCCGCAGCAAAAAAGCCGCCGAGCAGCACGCAGCAAAGGTGGCGCTGGAAAAATTGCAATAA
PROTEIN sequence
Length: 222
MAHKPEELQEVLHYTFKNPALLRIALTHTSYANESKVATTHNERLEFLGDSVLSVVVADYLFHQSGRPEGELTRMRASLVSEDALFQFAQEIQLGEYLRLGHGEDLGGGRSRPSVVSDAFEAVIAALYLDGGMEAARNFILPFITEGKTAEDDYKTRLQEVVQQDPSAVLKYEVTGETGPDHNKQFTVCVWRNGELLAEGRGRSKKAAEQHAAKVALEKLQ*