ggKbase home page

L3_114_000M1_scaffold_2057_7

Organism: dasL3_114_000M1_concoct_44_fa

near complete RP 43 / 55 BSCG 43 / 51 MC: 4 ASCG 12 / 38 MC: 1
Location: comp(7153..8934)

Top 3 Functional Annotations

Value Algorithm Source
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:EMS71645.1}; EC=2.7.13.3 {ECO:0000313|EMBL:EMS71645.1};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.1
  • Coverage: 602.0
  • Bit_score: 329
  • Evalue 7.60e-87
hypothetical protein n=1 Tax=Ruminococcus sp. JC304 RepID=UPI0002F3EBBD similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 588.0
  • Bit_score: 1157
  • Evalue 0.0
sensor with HAMP domain similarity KEGG
DB: KEGG
  • Identity: 29.8
  • Coverage: 594.0
  • Bit_score: 299
  • Evalue 1.70e-78

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

[Clostridium] termitidis → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1782
ATGCGTAAAAAATATCATGAGCTGTCTTTGGCGAAAAAATTTTCTCTTACAAGTATTGGCTTCTTTTTTCTCACAATCCTTGTATTAACTGTATTGATTCAGTTTTTATACGAAAAATCAGTATTAAATATCACCAGCGAAAGCTATAAGGAAAAGTTTGAGATAGTGTCTGATAACAGTCAGAGTATATTAGAGAATTCGGGAAAGATAGCTAAGGTAATATTAACAGATGAAGCAATACAAAACTGGTTTTTACAGGATTCTGAGGAATCAGCAGATCAGTTAAAATATAAAATGCAGGTAGAGAAACGTCTGGATTATTTGGATGCATTGTATCCAGATAAACAGTATAGCAGTATTTCTGTTTTTGACTCATATGGACATATGGTAAATTCTAACAGTATTCGATCTGAGGCATCAAAATACGAACAGTTTTTTAACATAATAAAAGAGAATTATAACGTAAAATGGTTGGATTTATATGAAGTATCCCTGGGAGATTATGAGAAAAATGGAATTGGTTATATCAGATATTATAGAGATTACGATTCGGGACTTATTAAAGGATATGTTCTTATAGAATATCAGTCGCCACTTCTGATAAATAATTTTGCACATATCAGATATGGGGAGACAGGCAGTTATCTGATTGCTGATACAGATGGAAACAAAAAAATAGAAAATGATCAGGATGTATCAGGAAATATTTCGGAAGAAGAGTATTTTCAATGGGCTGAAGATAATAAAAAAGGAGGAAAAGTATTCAGGATTGACGGTAAAAGATATCTTGTGACAGCGTCAGTAATCCCTACACTGGATTGGCTTATGATTGGTCTGACACCAGTGAATGAACTTACAAAAGCCGGGAAAGCGATGACACAGATTATTTATGTAGTAGGAATTATTGCTGCTTTAATCAGCACATTTTTCAGCCTGAGGGTTTCTCACAGTGTAACAAAGCCTTTGATATATTTGACAGATACCATGAAAAAATTTGGAAAAGGAGATCTTTCTGTACGTGTTCCTGTATTGTATGAGGATGAAATTGGAATATTATCGGAAGAGTTTAATAAGATGTCTGAACAAATCAGGCAGCTGGTTGATCAGGTATATAGAGAGCAACGGGCAAAAAGAAAATCTGAGCTTGCAGCACTTCAGGCACAGATTAATCCACATTTCTTATATAATACATTGAATAGTGTAAGTTCGCTTATCAAAATGAATTGTCCGGATGAAGCATTTATCATGATTCAGGCGATTGGTACATTTTATAGAACTTCACTTAGCGATGGAAAAACATTAATACCGCTGGAACAGGAAATAACAAATATAGAGAATTATATAAAAATACAGAAAGTCAGATATGGAAATAAAATAGAATATGAGATTGATATAGAAAATGAAATTTTGCAGGAGTGGATTGTAAAACTGACACTTCAGCCATTGATAGAAAATTCTATATATCATGGTATAAAGGAAATGAGGGGAAAAGGAATTATCCGAATCAAAGGATGGAAAGAGAAGAATAAGGTTTTTATTCAGGTGTCAGATAATGGGCTTGGAATTCCAGAAGAAAAATTAGAAGAACTGTTTAGTAAAGATTACAGAGAAAAAGGCTCAGCATTTGGATTATTTAATATTCAACAAAGATTGCAGATTTATTTTGGAAAAGAATATGGTCTTACAGTAGAAAGTAAACTGAGTCAGGGAACGAAGGCAACAGTGTGCATTCCTGTAGATTTTAAGAGAGAAGAGGATAGAAAATGCGGGTATTCCTTGTAG
PROTEIN sequence
Length: 594
MRKKYHELSLAKKFSLTSIGFFFLTILVLTVLIQFLYEKSVLNITSESYKEKFEIVSDNSQSILENSGKIAKVILTDEAIQNWFLQDSEESADQLKYKMQVEKRLDYLDALYPDKQYSSISVFDSYGHMVNSNSIRSEASKYEQFFNIIKENYNVKWLDLYEVSLGDYEKNGIGYIRYYRDYDSGLIKGYVLIEYQSPLLINNFAHIRYGETGSYLIADTDGNKKIENDQDVSGNISEEEYFQWAEDNKKGGKVFRIDGKRYLVTASVIPTLDWLMIGLTPVNELTKAGKAMTQIIYVVGIIAALISTFFSLRVSHSVTKPLIYLTDTMKKFGKGDLSVRVPVLYEDEIGILSEEFNKMSEQIRQLVDQVYREQRAKRKSELAALQAQINPHFLYNTLNSVSSLIKMNCPDEAFIMIQAIGTFYRTSLSDGKTLIPLEQEITNIENYIKIQKVRYGNKIEYEIDIENEILQEWIVKLTLQPLIENSIYHGIKEMRGKGIIRIKGWKEKNKVFIQVSDNGLGIPEEKLEELFSKDYREKGSAFGLFNIQQRLQIYFGKEYGLTVESKLSQGTKATVCIPVDFKREEDRKCGYSL*