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L3_114_000M1_scaffold_500_25

Organism: dasL3_114_000M1_concoct_60_fa

near complete RP 43 / 55 BSCG 49 / 51 ASCG 12 / 38
Location: 25572..29654

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262821 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:568.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 1360.0
  • Bit_score: 2728
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:568 RepID=R5ZMF4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 99.3
  • Coverage: 1360.0
  • Bit_score: 2728
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 1305.0
  • Bit_score: 1166
  • Evalue 0.0

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Taxonomy

Clostridium sp. CAG:568 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4083
ATGTTTGATTTAAGTAAACTAGCTAGTATCAAGATTGGTCTTGCATCTCCAGAAGTTATCAAGAGTTGGTCTTATGCTGAAAAGCAAAAGCCCGGATCTGGTGAAGTTAAGAAATCTGAGACAATTAACTATCGTTCACAAAAGCCTGAACCTGAAGGACTTTTTGCTGAAGAGATATTCGGACCTGCAAAGAGTTACGAATGTCACTGTGGAAAGTACAAGAAGAATTCCTACTCAGGAACAGTTTGTGATAAATGTGGCGTTGAAGTAACTTCTAAGTCTGTCCGTCGTGAGCGTATGGGTTATATCACCCTCGCTTGTCCTTGTACTCATATTTGGTACCTCAAGGGAACACCTTCCAAGATTGCTTTGATTTTGGATGTTCCTCCAAAGGATTTGGAAGAAGTCGTATATTTCCAATCCCATATTGTTTTGAATCCTGGCCAATACTGTCTTGATCACAACTTGCTTCAAAAGAAACAAGTTTTGGATGAAAGAGCAGGACGTGATATCTTCCAAGAAATTTTAAAGAGTTTCATGGAGGGAGAAAATCCTGTTATCGATCCTAACCAAACTGAAACTGATGATTATAAGAAGTGTCAACGTTTGATCAATAGCATGGCTCATGAGAATGAACCTTATGATTTTGAAACTGCTGCTCGCTTCATTAAGAAGTTGGTCGGTGCTGAGTTTGGTTGGGGAGCTGATGCTGTTAAGACTTTGCTCCATGAACTCGATCCTGAAAATATCGATTCTGTAACTGGAAAATCCAAGCTCGACGTAGAATTTGAAACAATTGAAAAAGCTATTAGATCATATCCTGATCCTAAGAATCAAAAGCGTATCAAGCTTATGAAACGCTTGGATGTTGTAGAATCCTTCCGCAATTCTAAGAATAAGCCTGAATGGATGATTCTCGATGTTATTCCTGTAACTCCTCCTGATCTTCGTCCTTTGCTTCAATTGGATGGTGGACGTTATGCAACTTCAGATATCAACGAATTGTATCGTCGTGTTATCACTCGTAACTCTTTGTTGAAGAGATTGATGGATCAAAAAGCTCCTACAGTCATTTTGGTTAACCAAAAGCGTATGGTTCAAGAAGCTGTTGATGCTTTGATCGATAATGGAAGAAGAAACAACAAGCCTCTTACTGGTGTATCTGGTCGTCCTTTGAAATCTTTGTCTTCTACACTCAAAGGAAAACAAGGACGTTTCCGTTTGAACTTGTTAGGAAAGCGTGTTGACTATTCTGGACGTTCAGTCATTTGTGTCGGACCTGAATTGAGATTGGATGAGTGTGGTTTACCTCGCGAGATGGCAATTCAACTCTTCAAGCCATTCATCATGAGCGAGCTCATGAAGGATAAGTATGCTGCCAACATCAAGATTGCCGAACAGATGATTACAAGATACGATGATAAAGTCTATGATGTTTTGGAAAAGATTGTTCCTAATCACCCTGTTCTCTTGAACCGTGCTCCTACATTGCACCGTTTGGGTATTCAAGCCTTCAGACCTGTTTTGGTCGACGGAAGAGCTATGAGATTGCATCCATTGGTTTGTCCTGGATTCAACGCTGACTTCGATGGTGACCAAATGGCTGTCCACGTTCCTCTTTCTAGAGAGGCTCAACAAGAAGCTTTCGATTTGATGATTTCCTCGAGAAATATTCTTTCTCCTCGTGACGCAAAGGTTATAGCTATTCCTGTTCAGGACGTCGATGTCGGTCATTACTATCTGACTTCTGAGCAAACTCCAGATGATTTCTTGAGCCAAGCCGATGCTGCTAGAAAGCATGGTGATGTTGAGGAAGCTGAGAAATTTGAAAGATTTGCCAGAATGGATGGTCACGTGTTCCGTAACTTCGATGAAGTTATGCGTGCTTATCAAACTGGTGTCGTTCATACAAATAACCGTATTGCGATTCCAGCTGAGTCTTTAGGAAAGTATGGAGTATTTACTGAAGAGCAAAATAGCAAGTATTTGATTACTACTGTCGGAAAGCTTATCTTCAACGATATGTTCCCTTCAGACTTCCCATATGTCAACGATGCACCTTCTCATTGCAAAGGTGAGTTGAAATCAACTCCTGTTGGAATCGATTGGTTCTTCGTTCCTAAGGGAACAGACATCAAGGATTACCTTAAGAATCATTGGAATCCTACCAAACCTGTGGATAAATCAGAGCTTTCTGCCATTATCAACGCTTTGTTCTTGAGATATAAGTCTAAACGTACATCTTGGTTGTTGGATAAGATCAAGGATACTGGTTACTATTATTGTACTAAGCTCGGATTAACTATTTCTATCACTGATATCAACACTGTTGAAGGACGTGATGAAATTCTTGCTGAAGGTGATAAGAAGGTTGCCGAAATCAACGATTTCTTTAACATGGGTCTTATCACTGATGATTCTCGTCACAGTGAGACATTGGATATTTGGACAAAGGCCAAGGATAAAATCACTGATAAGGTTAAGGAAAAGATGGCTCGTGAGAGCCGTAACCCTGTCTTCATGATGGCTAACGCTAAGGCTCGTGGTTCAGTCAATAACTTCGTTCAGTTGATTGGTACCAGAGGTTTGATGGCTGGACCTAACAACAAGATTATCGAAATCCCTGTCAAAGACTGCTTCCGTATGGGTATGTCAGTCAACGAATACTTCACCGCTACACACGGTGCTCGTAAAGGTATGACCGATACAGCTTTGAAGACAGCTGACTCTGGATACTTAACACGTCGTTTGGTCGATGTTTCTCACTCTGTCGTCATCCGTGAAACTGATTGTGGATGTGATCATGGATTCTGGGTCGAAGCATTGTATGATGATAAGAACAAGTTGAAACTCTCAGTCGCTGATCGTTGCTATGGACGTTATTCTTGTCACGATATTTGTGACAAGGATGGCAATGTCATCATTCCTGCCAACACTTATCTCGATAAGGCTGAGTGCTCATTGATTAAGGGAGCTGACCTTGAAAGAGTAGAGATTCGTTCTCTATTGACTTGTGAGGCTAAGGATGGAGTTTGTGCTCACTGTTATGGACTTAACATGGCTACCGGTGAGATGTGTAAGATTGGTGATACTGTTGGTATCATGGCTGCACAATCAATCGGTGAACCTGGTACACAGTTGACTTTGCGTACATTCCACGAAGGTGGAACTGCAGGTAGTGATATCACTCAAGGTTTGCCTCGTGTTCAGGAGTTGCTCGAAGTCCGTAATCCTAAGGGAGAATGTATCATGACTGAGATTGATGGTACCGTAACTGATATCACCAATAAGAACGGAAGAGATATCATCTCTATCACAGGTGTCTTGCCTAACAATGATAAATCTTATACCTGTAACTACAACTCTCATGTCATTGTAAAGGTTGGAGATGTCGTTAAAGCTGGTGACGCATTAACTGTTGGATCTAAGGATCCTAAGAAGTTATTGGATGTTTGTGGTGTTGAGAAGACTGAGCGTTACCTTATCGACCAGGTACAAAATGTTTACCAGTCTCAGGGTATCGATTTGTCTGATAAGCACTTGGAAGTCATCGTTCGTCAGATGATGAAGAAGATGTTGATTTCTGATGGTGGAGACACCAAGATGATTTCCGGAAGCCGTGTAGACTTGCCTGAGTTTACCGCTATGAACCAACAAGCTTTGGCTCATGGTCTTAATCCTGCAGTCGGAACTCCTATGATTTTGGGTGTTACCAAAGCTGCTTTGGATACTACTTCATTCTTGTCTTCTGCTTCATTCCAGGAGACCACAAGAGTTCTTACTGACGCTGCTATCAAAGGTAAGGTCGATGAACTTAAAGGTCTTAAGGAAAACGTCATGTTGGGTAAGTTGATTCCTGCTGGAACTACAATAGATCCTCTTCCTGCTGGTGAGAACTTCGTCGCTGAAGAACGTCTCAGCAAGAGTGACTTCTATTCAGTCCAGTCTGGATTCTCTGACACTGAATATCATGATGATTATCTCGATCAATTCAGTGGAGATCAACAAACTGATTCCACAGGTGAAGTATTACCTATGGCAAAGCCTGGCGAAGACAATTCCGGATATAATCCTGAATTCTAG
PROTEIN sequence
Length: 1361
MFDLSKLASIKIGLASPEVIKSWSYAEKQKPGSGEVKKSETINYRSQKPEPEGLFAEEIFGPAKSYECHCGKYKKNSYSGTVCDKCGVEVTSKSVRRERMGYITLACPCTHIWYLKGTPSKIALILDVPPKDLEEVVYFQSHIVLNPGQYCLDHNLLQKKQVLDERAGRDIFQEILKSFMEGENPVIDPNQTETDDYKKCQRLINSMAHENEPYDFETAARFIKKLVGAEFGWGADAVKTLLHELDPENIDSVTGKSKLDVEFETIEKAIRSYPDPKNQKRIKLMKRLDVVESFRNSKNKPEWMILDVIPVTPPDLRPLLQLDGGRYATSDINELYRRVITRNSLLKRLMDQKAPTVILVNQKRMVQEAVDALIDNGRRNNKPLTGVSGRPLKSLSSTLKGKQGRFRLNLLGKRVDYSGRSVICVGPELRLDECGLPREMAIQLFKPFIMSELMKDKYAANIKIAEQMITRYDDKVYDVLEKIVPNHPVLLNRAPTLHRLGIQAFRPVLVDGRAMRLHPLVCPGFNADFDGDQMAVHVPLSREAQQEAFDLMISSRNILSPRDAKVIAIPVQDVDVGHYYLTSEQTPDDFLSQADAARKHGDVEEAEKFERFARMDGHVFRNFDEVMRAYQTGVVHTNNRIAIPAESLGKYGVFTEEQNSKYLITTVGKLIFNDMFPSDFPYVNDAPSHCKGELKSTPVGIDWFFVPKGTDIKDYLKNHWNPTKPVDKSELSAIINALFLRYKSKRTSWLLDKIKDTGYYYCTKLGLTISITDINTVEGRDEILAEGDKKVAEINDFFNMGLITDDSRHSETLDIWTKAKDKITDKVKEKMARESRNPVFMMANAKARGSVNNFVQLIGTRGLMAGPNNKIIEIPVKDCFRMGMSVNEYFTATHGARKGMTDTALKTADSGYLTRRLVDVSHSVVIRETDCGCDHGFWVEALYDDKNKLKLSVADRCYGRYSCHDICDKDGNVIIPANTYLDKAECSLIKGADLERVEIRSLLTCEAKDGVCAHCYGLNMATGEMCKIGDTVGIMAAQSIGEPGTQLTLRTFHEGGTAGSDITQGLPRVQELLEVRNPKGECIMTEIDGTVTDITNKNGRDIISITGVLPNNDKSYTCNYNSHVIVKVGDVVKAGDALTVGSKDPKKLLDVCGVEKTERYLIDQVQNVYQSQGIDLSDKHLEVIVRQMMKKMLISDGGDTKMISGSRVDLPEFTAMNQQALAHGLNPAVGTPMILGVTKAALDTTSFLSSASFQETTRVLTDAAIKGKVDELKGLKENVMLGKLIPAGTTIDPLPAGENFVAEERLSKSDFYSVQSGFSDTEYHDDYLDQFSGDQQTDSTGEVLPMAKPGEDNSGYNPEF*