ggKbase home page

L3_122_000M1_scaffold_614_28

Organism: dasL3_122_000M1_metabat_metabat_36_fa_fa

near complete RP 49 / 55 MC: 2 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(33226..33978)

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasD n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3X4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 163.0
  • Bit_score: 194
  • Evalue 1.10e-46
CRISPR system CASCADE complex protein CasD {ECO:0000313|EMBL:ERJ96449.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 163.0
  • Bit_score: 194
  • Evalue 1.60e-46
CRISPR-associated protein, Cas5e family similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 170.0
  • Bit_score: 134
  • Evalue 3.10e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ruminococcus callidus → Ruminococcus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 753
ATGTCGCCTGAACTTTTCAGCAGAACAGGAGAGCCAAGCAGATCGGAGTGGGCAATATATATTTCGCTGACTATGTTTGCGCTTCATCAGCAGGGAAGTTCGGAAACAGTTCATTGTGAGGGAAGATCCCTTGGAAGTGCAGCCGCTGATCTTATGGAAGAGAAAACTGCTGAAAACAGAGAACGTATCATGCGCAGATTTGGACCTGTTGTCACAGCCAAAGATATGCCTGAACTTTCACATCATATAAGAGGTCTTGTGCCGCTTACAACGCTCCATTTTGGCGTTTGTGCCGATAAGGAGGGCGTTTTGCTTAAAGATTTTCATACTGTGCAAGTACCAGGAGAAAAACATCCTGAAGTATCATATCGTTATTATCTGTCAGACGCAGTGTTTCTTGTCGCACTTGAAAGTGATGATAAATCATTGCTGGAGAGTATAGCTTCTGCACTGCAAAAGCCTGTTTATCCGCTGTATCTTGGACGAAAGTCCTGTCCGCCAACTTTGCCTATCGTTCTTGGCGTTAAGGATGAGGATATTCTTACGGCACTAAAGACCGAGCCATATCTTTATAAGAACGCTCACCGAAAAAGCGTGCGCATTTCCTATGAAGTCACATCAGGCGGCGCAATGGTGCAGGATATTCCGCTGTCATTCTCACAGCTCCACAGAAAGCACGGCTGGCGAATGAAGCGTGAAGAACTTCTTGCTGTGGATAGTAACCCAGAGCATGACGCCTTTTCTGAATTGTGA
PROTEIN sequence
Length: 251
MSPELFSRTGEPSRSEWAIYISLTMFALHQQGSSETVHCEGRSLGSAAADLMEEKTAENRERIMRRFGPVVTAKDMPELSHHIRGLVPLTTLHFGVCADKEGVLLKDFHTVQVPGEKHPEVSYRYYLSDAVFLVALESDDKSLLESIASALQKPVYPLYLGRKSCPPTLPIVLGVKDEDILTALKTEPYLYKNAHRKSVRISYEVTSGGAMVQDIPLSFSQLHRKHGWRMKREELLAVDSNPEHDAFSEL*