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L3_128_007G1_scaffold_218_4

Organism: dasL3_128_007G1_concoct_6_fa

partial RP 36 / 55 MC: 4 BSCG 35 / 51 MC: 1 ASCG 12 / 38 MC: 1
Location: 5072..9295

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 1407.0
  • Bit_score: 2750
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322, ECO:0000313|EMBL:AIX75716.1};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1484157 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea sp. PSNIH2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 1407.0
  • Bit_score: 2750
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RJ21_ERWST similarity UNIREF
DB: UNIREF100
  • Identity: 96.6
  • Coverage: 1407.0
  • Bit_score: 2672
  • Evalue 0.0

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Taxonomy

Pantoea sp. PSNIH2 → Pantoea → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4224
GTGAAAGACTTACTTAAGTTTCTGAAAGCGCAAACTAAAACCGAAGAGTTTGATGCGATCAAGATTGCGCTGGCCTCGCCAGACATGATCCGTTCCTGGTCTTTCGGTGAAGTGAAAAAGCCGGAAACCATTAACTACCGTACCTTCAAGCCAGAGCGCGATGGTCTGTTCTGCGCCCGTATTTTCGGGCCGGTAAAAGATTACGAATGCCTGTGCGGCAAATACAAGCGCCTGAAACACCGTGGCGTGATCTGTGAGAAGTGCGGCGTTGAAGTGACCCAGACCAAAGTGCGTCGTGAGCGCATGGGCCACATCGAGCTGGCTTCCCCGACCGCGCACATCTGGTTCCTGAAATCGCTGCCGTCCCGTATCGGCCTGCTGCTGGATATGCCGCTGCGCGATATCGAACGCGTGCTGTATTTCGAATCTTATGTCGTGGTTGAAGGCGGCATGACCAACCTCGAGAAGCGCCAGATCCTGACTGAAGAGCAGTATCTCGACGCGCTGGAAGAGTTTGGCGACGAATTCGACGCGAAAATGGGCGCGGAAGCGATCCAGGCGCTGCTGAAAAACATGGATCTGGAGCAGGAATGCGAGCAGCTGCGCGAAGAGCTGAACGAAACCAACTCCGAGACCAAGCGTAAGAAGCTGACCAAGCGCATCAAGCTGCTGGAAGCCTTCGTACAGTCTGGCAACAAGCCGGAGTGGATGATCCTGACCGTGCTGCCTGTGCTGCCGCCGGATCTGCGTCCTCTGGTTCCGCTGGACGGCGGTCGTTTTGCGACTTCTGACCTGAACGATCTCTATCGTCGCGTCATTAACCGTAACAACCGTCTGAAACGACTGCTGGATCTGGCTGCGCCGGACATCATCGTACGCAACGAAAAACGTATGCTGCAGGAAGCGGTAGACGCCCTGCTGGACAACGGTCGTCGCGGTCGCGCGATCACCGGCTCCAACAAGCGTCCGCTGAAATCGCTGGCTGACATGATTAAAGGTAAGCAGGGTCGTTTCCGTCAGAACCTGCTGGGTAAACGCGTCGACTACTCTGGTCGTTCCGTTATTACCGTAGGTCCTTACCTGCGTCTGCATCAGTGCGGCCTGCCGAAGAAAATGGCGCTCGAACTGTTCAAACCGTTCATCTACGGCAAGCTGGAACTGCGTGGCCTCGCGACCACCATCAAAGCCGCCAAGAAAATGGTTGAGCGTGAAGAAGCCGTGGTTTGGGATATCCTGGACGAAGTGATCCGCGAACACCCGGTTCTGCTGAACCGTGCGCCGACGCTGCACCGTCTTGGCATCCAGGCGTTTGAGCCGGTTCTGATCGAAGGTAAAGCAATTCAGCTGCACCCGCTGGTTTGTGCGGCCTATAACGCCGACTTCGATGGTGACCAGATGGCTGTTCACGTACCGCTGACGCTGGAAGCCCAGCTGGAAGCGCGTGCGCTGATGATGTCTACCAACAACATCCTGTCTCCGGCGAACGGTGAGCCGATTATCGTTCCGTCTCAGGACGTTGTTCTGGGTCTGTACTACATGACCCGCGACAAAGTGAACGCGAAAGGCGAAGGCATGGTGCTGACCGGCCCGAAAGAAGCTGAGCGTGTTTACCGCGCCGGCCTGGCCGAGCTGCATGCGCGCGTTAAAGTGCGTATCACTGAATATGAAAAGAATGAGCAGGGTGAATTCATCCCGAAAACCAGCCTGATCGATACCACTATCGGTCGCGCTATTCTGTGGATGATCGTGCCGCAGGGTCTGCCTTACTCCATCGTCAACCAGGCGCTGGGTAAAAAGGCGATCTCCAAAATGCTGAACACCTGTTACCGCATTCTGGGCCTGAAACCGACCGTTATCTTTGCTGACCAGACCATGTACACCGGTTTTGCCTACGCAGCCCGTTCAGGCGCTTCCGTAGGTATCGACGACATGGTTATCCCGGCGAAGAAAGTGGAGATCATCACCGAAGCGGAAGCGGAAGTAGCTGAGATCCAGGAGCAGTTCCAGTCTGGTCTGGTAACCGCTGGCGAACGCTATAACAAAGTTATCGATATCTGGGCCGCGGCCAACGAACGTGTTGCCAAGGCGATGATGGAAAACCTCTCTACCGAAACGGTTATCAACCGCGACGGCGAAGAGGAAAAACAGGTTTCCTTTAACAGCATCTTTATGATGGCCGACTCCGGTGCGCGTGGTTCTGCCGCTCAGATCCGTCAGCTGGCGGGTATGCGTGGCCTGATGGCGAAGCCGGATGGCTCCATCATCGAAACGCCGATCACTGCGAACTTCCGTGAAGGTCTGAACGTACTCCAGTACTTCATCTCCACGCACGGTGCGCGTAAAGGTCTGGCGGATACCGCATTGAAAACGGCAAACTCCGGTTATCTGACCCGTCGTCTGGTTGACGTGGCGCAGGATCTGGTGGTGACCGAAGATGACTGCGGCACCCTCGAAGGCATTACCATGACGCCGGTTATCGAAGGTGGCGACGTTAAAGAGCCGCTGCGTGAGCGCGTACTGGGCCGTGTAACGGCGGAAGACGTACTGAAGCCGGGTACGGCGGACATTCTGGTTTCCCGCAACACCCTGCTCGATGAGCACTGGTGTGACGTGTTGGAGCAGAACTCTGTCGACAGCGTGAAAGTGCGTTCCGTTGTTGCCTGTGAAACTGACTTCGGCGTCTGTGCGCACTGCTACGGTCGTGACCTGGCGCGTGGCCATATCATCAACAAAGGTGAGGCCATCGGCGTTATCGCGGCGCAGTCCATCGGTGAGCCGGGCACACAGCTGACGATGCGTACGTTCCACATCGGTGGTGCGGCATCGCGTGCGGCTGCTGAATCCAGCATTCAGGTGAAGAACAAAGGTACCATCAAGCTGACGAACGCCAAGTCGGTAACCAACTCCGCTGGCAAGCTGGTGATCACTTCCCGTAACGTTGAACTGAAAATGATCGACGAATTCGGGCGCACCAAAGAAAGCTATAAAGTGCCTTACGGCGCGACCATGGCGAAAGGTGACGGTGAGCAGGTCAATGCTGGTGAAACAGTAGCGAACTGGGATCCGCACACCATGCCGGTTATCACCGAAGTGAGCGGTTTCATCCGTTTCACCGACATGATCGACGGCCAGACCATTACCCGTCAAACTGACGAGCTGACCGGTCTGTCTTCGCTCGTGGTGCTGGACACCGCAGAGCGTACCGCTGGTGGTAAAGACCTGCGTCCGGCGCTGAAAATCGTTGACGCTAACGGCGACGACGTTCTGATCCCGGGCACCGATATGCCGGCTCAGTACTTCCTGCCGGGCAAAGCGATTGTTCAGCTGGAAGACGGCGTGAAGATCAGCTCTGGTGATACCCTGGCGCGTGTGCCTCAGGAATCTGGCGGTACCAAGGATATTACCGGTGGTCTGCCGCGCGTTGCCGACCTGTTCGAAGCGCGTCGTCCGAAAGAGCCTGCGATTCTGGCTGAAATTAGCGGTATCGTCTCCTTCGGTAAAGAGACCAAAGGCAAGCGTCGTCTGGTGATCACGCCGGTCGACGGCAGCGAGCCGTACGAAGAGATGATTCCGAAATGGCGTCAGCTCAACGTATTTGAAGGCGAACGCGTTGAACGTGGTGACGTGATCTCCGACGGACCAGAATCTCCGCATGACATTCTGCGTCTGCGTGGCGTTCAGGCTGTGACCCGTTACATCGTTAACGAAGTGCAGGACGTATACCGTCTGCAGGGCGTTAAGATTAACGATAAGCACATCGAAGTTATCGTGCGTCAGATGCTGCGTAAAGCAACCATCTCCAGCGCGGGCAGCTCCGAGTTCCTGGAAGGCGAGCAGGTAGAATACTCACGCGTGAAGATTGCCAACCGCGATCTGGAGATCAACGGCAAAGTGGGCGCCACATACGCTCGCGACCTGTTGGGCATCACCAAAGCGTCTCTGGCAACCGAATCGTTCATCTCTGCGGCATCGTTCCAGGAGACCACCCGTGTCCTGACCGAAGCAGCGGTAGCAGGCAAGCGCGACGAGCTGCGCGGCCTGAAAGAGAACGTTATCGTGGGTCGTCTGATCCCGGCCGGTACCGGTTACGCTTACCATCAGGATCGTATGCGTCGCCGTGCGGCTGGCGAGCCGACCGTTGCGCCTCAGGTGAGCGCGGAAGAAGCGACGGCCAGCCTGGCCGAGCTCCTGAACGCTGGCCTTGGTGGCAGCGACGACGAGTAA
PROTEIN sequence
Length: 1408
VKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCARIFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPTAHIWFLKSLPSRIGLLLDMPLRDIERVLYFESYVVVEGGMTNLEKRQILTEEQYLDALEEFGDEFDAKMGAEAIQALLKNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILTVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQEAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPYLRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEARALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDKVNAKGEGMVLTGPKEAERVYRAGLAELHARVKVRITEYEKNEQGEFIPKTSLIDTTIGRAILWMIVPQGLPYSIVNQALGKKAISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPAKKVEIITEAEAEVAEIQEQFQSGLVTAGERYNKVIDIWAAANERVAKAMMENLSTETVINRDGEEEKQVSFNSIFMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGARKGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRERVLGRVTAEDVLKPGTADILVSRNTLLDEHWCDVLEQNSVDSVKVRSVVACETDFGVCAHCYGRDLARGHIINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGTIKLTNAKSVTNSAGKLVITSRNVELKMIDEFGRTKESYKVPYGATMAKGDGEQVNAGETVANWDPHTMPVITEVSGFIRFTDMIDGQTITRQTDELTGLSSLVVLDTAERTAGGKDLRPALKIVDANGDDVLIPGTDMPAQYFLPGKAIVQLEDGVKISSGDTLARVPQESGGTKDITGGLPRVADLFEARRPKEPAILAEISGIVSFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFEGERVERGDVISDGPESPHDILRLRGVQAVTRYIVNEVQDVYRLQGVKINDKHIEVIVRQMLRKATISSAGSSEFLEGEQVEYSRVKIANRDLEINGKVGATYARDLLGITKASLATESFISAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEPTVAPQVSAEEATASLAELLNAGLGGSDDE*