ggKbase home page

L3_130_000M1_scaffold_937_12

Organism: dasL3_130_000M1_metabat_metabat_44_fa_fa

near complete RP 38 / 55 MC: 1 BSCG 47 / 51 MC: 2 ASCG 13 / 38 MC: 1
Location: comp(12582..13079)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 n=1 Tax=Eubacterium ramulus ATCC 29099 RepID=U2RCD6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 159.0
  • Bit_score: 283
  • Evalue 9.50e-74
Sigma-70 region 2 {ECO:0000313|EMBL:ERK51253.1}; TaxID=1256908 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ramulus ATCC 29099.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 159.0
  • Bit_score: 283
  • Evalue 1.30e-73
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 159.0
  • Bit_score: 112
  • Evalue 6.30e-23

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Eubacterium ramulus → Eubacterium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 498
ATGAGTGTAATAAACAAGGAAGAATTGTCAAAGCTGATCTTGGAAAATCAAAAGGAAATGTATGTGCTGGCTTATTCCATACTGCAAAATCAGGCGGATGCACAGGACGCAGTGAGTGAATGTATTGTGCGTGCCTTTGAAAATCGTACAAGTCTCAGAAAACGTACAAGTGCAAGATCATGGCTGATGAAGATTCTGATCAACGTTTCCCGTTCAGCAATCACGAAAAGACAGAAGGTCGTGCTTTTTGCTGATCCGGAACAGTACGAACAGGTGACAGAAGTGCCACAGGATCATTTGTGGTCAGCGATTCTGGAACTGTCAGAAAATGTGCGGGTTATCATGGTTCTCTATTACTATGATGGTTTATCGGTGAGGGAGATCAGTGCGATGTTGAACATTCCGGAAGGAACGACAAAGACCAGACTCTCTGCCGGGAGAAAACAACTGGCAAAATGGATGGAGAACGGAAAGGAGAGCGGACATGTTATCAGATGA
PROTEIN sequence
Length: 166
MSVINKEELSKLILENQKEMYVLAYSILQNQADAQDAVSECIVRAFENRTSLRKRTSARSWLMKILINVSRSAITKRQKVVLFADPEQYEQVTEVPQDHLWSAILELSENVRVIMVLYYYDGLSVREISAMLNIPEGTTKTRLSAGRKQLAKWMENGKESGHVIR*