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L3_131_000M1_scaffold_1596_1

Organism: dasL3_131_000M1_concoct_45_fa

near complete RP 46 / 55 BSCG 51 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: 3..3773

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:411.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.2
  • Coverage: 1263.0
  • Bit_score: 1384
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium sp. CAG:411 RepID=R7I2F3_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 1263.0
  • Bit_score: 1384
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 1229.0
  • Bit_score: 1340
  • Evalue 0.0

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Taxonomy

Clostridium sp. CAG:411 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3771
GAAGGAATACAGGCGGGTCAGGTCAATCTCGGAAGCGAGAGAGACGGCCTTTTCTGCGAAAAGATATTCGGGCCGATGAAGGATTGGGAGTGCCACTGCGGAAAATATAAACGGGTAAAATACAAGGGGCATATCTGCGAGAAATGCGGCGTGGAGATCACCCGCTCGAAGGTGCGCCGCGAGAGAATGGGCCATATCGAGCTGGCGGCCCCCGTCTCCCATATCTGGTATTTCAAAGGGGTTCCCTCCAAAATCGGGCTGTTGCTCGACATGGGGCCCAAACAGCTGGAGCAGGTGATCTATTTCGCCTCCTACGTGGTTCTCGACCCCGGCAAGGTGAACGAGCTTGCCTATAAGCAGGTCATCAACGACAAACAGCTCCGCGAGATCGAGGAGCGCTTCGGCGACAGCTCGGCGACGGGCCTCAAGGTCGGCATGGGCGCGGAGTCCGTGCGCGAGCTTTTGATGGCGGTAGATCTCGAAAAAGAGAGCGACGCCTGCAAGAAAGTCATCGCCGACAACCCCACGGGACAAAAGGCGATCAAGGCGATCAAACGCCTCGAAGTGGTGGAATCTTTCCGAAAGAGCGGCAATCGTCCCGAATGGATGATTCTCACCGTTCTGCCCGTCATTCCCCCCGACATTCGTCCCATGGTGCAGCTGGACGGCGGCAGATTCGCCTCCTCCGATTTGAACGACCTCTATCGCCGCGTCATCAACCGCAACAACCGTCTGAAAAAGATGATGGAGATCGGCGCGCCCGACATGATCATCAAGAACGAGAAGCGTATGTTGCAGGAAGCCGTGGACGCGCTTATCGACAACGGCAGGAGAGGAAAGCCCCTGAGCGGACCTTCCAATCGCGAACTCAAATCCCTTTCGGGAATGCTTCGCGGCAAGCAGGGGCGTTTCCGTCAGAACCTGCTCGGCAAGCGAGTGGACTATTCGGGACGTTCGGTTATCGTCGTCGGTCCCGAGTTGAAAATTTATCAGTGCGGTCTGCCCAAGGAAATGGCGATCGAACTGTTCAAGCCGTTCATCATGAAGCGGCTGGTGGAGAGCGGGCAGTGCCACAACATCAAGACGGCGAAGCGCGCCGTGGAAAAGGCGAAGGATATGGTCTGGAACGTCCTCGAAGACGTCATCAAGGATCATCCCGTACTTTTAAACCGCGCTCCCACGCTGCACAGGCTTTCCATTCAGGCGTTCGAGCCCGTTCTGATCGAAGGCAGAGCCATTAAGATCTCCCCGCTCGTCTGCGGACCTTTCAACGCGGACTTCGACGGCGACCAAATGGCCGTGCACCTTCCTTTGAGCATCGAAGCGCAGGCGGAAGCGAGATTTTTGATGCTTTCCGCCAATAATATTTTGAAACTTGCCGACGGCAAATCGGTCATGTCCCCGACGCAGGATATGATTATCGGCGCGTACTGTCTTACCATCAAGCGCTGTGAAGAGGGTAGAAGATATGACGATCAGGGTCGTCCCGACGACGACGGGGAGGTCTATATCCCGCCCGTGTACTCGTCCGAAAACGAGGCGATTTTGGCGTATCAGACCAAAGCCGCGCACGAGCAGGACGAAATGTATTTAAAGCGCGTCGTGGAACTTCCCGAGGGCAAGTTCGACGATCTGCCTTTGCCGTATACCTGCCCGATCGACAACACTGATTTCGACGAAAAGAAAGCGGTGCTGATCAAGGAAGCGACGGTGCGCCTCAATCCCAAAACGGGCAGGCGCGAGGTGAGCGGCATCATCAAGACGACCATCGGCCGTCTGATCTACAACGACGGTCTGCCGCAGGATCTCGGCTTCGTCAAGAGAGATACGCCCGAATCCTATCTCAGACTCGAACTCGACACCGAGTTTATCGGCAGCGCGCGCGCGATCGGAAAGAAACATCTCTCCCGTATCGTCGAAGCCTGCTTCAAGACGGGCGCGGCGCCCAAAGCGTCGTACGTGCTCGACGCGATCAAGGAAAGAGGGTATAAATATTCCACGCTGGCGGCGCTTACGACCTCCGTCTTCGACATGAAGATCCCCGAGGAAAAGGAAGACATCGTCAACAACGCGGAAGCGGAAGTTTCCAAGATCTCCAAGAAATACGCCAGAGGTCTTTTGAACGAAGAGGAGAGATACCTCGCCGTTATCTCGCAGTGGGATACCGCGACGGATAAAGTGGCGGGACTCCTCAAAAAGCAGGGCGAAGAAGATAAGTTCAACCCCATCTGGATGATGGCGGATTCCGGCGCCCGCGGCTCTATCGACCAGATCAAACAGCTTTCCGGTATGCGCGGACTCATGGTCAACCCTCAGGGTAAAAAGATCGAGGTCCCCGTGAAATCGTGTTTCAGAAACGGCCTTTCCGTTCTCGAATACTTCATTTCCTCGCACGGCGGCCGTAAAGGTTTGACGGATACCGCTTTGAAAACAGCCGACTCGGGATATCTCACCCGCCGTCTTGTCGACGTTTCGCACGAGATCATCGTCCGCGAGGACGACTGCTATGCGGGCAGAAAACCGCAGGGCATGAAGGTGCGGGCGATTTTCGGCAGCGACGGCAGAGAGATTGAAGGTCTGAAAGACAGACTGACGGGGCGTTTCGCGGCGGAAAACGTCGTCAATCCCGCGACGGGCGAGATCATGGTGGGACAGAACGAGTTTATCACCGAGGAGCTCGCCAAAGAGATTTGCGACGCGGGCATTTCGGAAGTTTCCATCCGCAGTATCTTCACCTGTAACTCCCGTTTCGGCGTCTGCGCGAAATGTTATGGCAAAAATATGGCTACCACGCTTCCCGTGCAGGTGGGCGAAGCGGTCGGCACGATCGCCGCGCAGTCCATCGGCGAACCGGGCACCCAGCTCACCATGCGTACCTTCCATACGGGCGGTATCGCGGCGACGGGGGACATTACGCAAGGTCTGCCCCGCGTCGAGGAGTTGTTCGAAGTCAGAAAACCCAAGGGCTGCGCGACGATCTGCGAAGTCGAGGGCATCATTGATCTCGACGACAGCGACGGCTCCAAGCATATCAAGATCCTCGACGAGGCGACGAAGGAAGTCAAGAAGGAATACTCGCTTCCCTTCAATGCCGAAATCAAGGTCAAGAAAGGGGATAAAGTGGTCCCCGGGGTACTTCTCAACACGGGCAGCGTCTATCCTCAGGATATTCTGCGCGTGCAGGGCGTCAAGGGCGTACAGGATTACCTCCTCGAACAGGTTCAGTCCGTCTATCGTTCCCAGGGCGTGGATATCAACGATAAGCATATCGAAATTATCGTGCGCCAGATGCTCAAAAAAGTCAGGGTGGAGAGTTCGGGCGATACCGATCTGCTTCCCGGCGAACTCGTGGATATGGTCACTTTCCAGGACGAGTGCGCCAAAGCGATGCAAAAGGGCGGCGCTCCCGCGCTTGCCAAGAGGGTGCTCCTCGGCATCACGAAGGCGTCCCTCGCCACGGACAGCTTCCTTTCGGCGGCGTCCTTCCAGGAAACGTCGAGAGTGCTTACGGAAGCCGCGATCCGCACCAAGAGAGATTACCTCGTAGGCCTTAAAGAGAACGTCATCATCGGTAAGCTGATCCCCGCAGGGACGGGCATGAAGGAATACAAAGGACTTTCTCCCCAATTTGTCGGCAATTATAAAGACGCGGAGGCAAGCGTATCCGAAGAAATTTCCGCTTCCGTGCCCTATGAAAAACCGACCGCTTCTTTGACCGAGGAAACGGCTCCCATTTCCGCCGAATCTTCCGTAGAAGATATGCTCATTTAA
PROTEIN sequence
Length: 1257
EGIQAGQVNLGSERDGLFCEKIFGPMKDWECHCGKYKRVKYKGHICEKCGVEITRSKVRRERMGHIELAAPVSHIWYFKGVPSKIGLLLDMGPKQLEQVIYFASYVVLDPGKVNELAYKQVINDKQLREIEERFGDSSATGLKVGMGAESVRELLMAVDLEKESDACKKVIADNPTGQKAIKAIKRLEVVESFRKSGNRPEWMILTVLPVIPPDIRPMVQLDGGRFASSDLNDLYRRVINRNNRLKKMMEIGAPDMIIKNEKRMLQEAVDALIDNGRRGKPLSGPSNRELKSLSGMLRGKQGRFRQNLLGKRVDYSGRSVIVVGPELKIYQCGLPKEMAIELFKPFIMKRLVESGQCHNIKTAKRAVEKAKDMVWNVLEDVIKDHPVLLNRAPTLHRLSIQAFEPVLIEGRAIKISPLVCGPFNADFDGDQMAVHLPLSIEAQAEARFLMLSANNILKLADGKSVMSPTQDMIIGAYCLTIKRCEEGRRYDDQGRPDDDGEVYIPPVYSSENEAILAYQTKAAHEQDEMYLKRVVELPEGKFDDLPLPYTCPIDNTDFDEKKAVLIKEATVRLNPKTGRREVSGIIKTTIGRLIYNDGLPQDLGFVKRDTPESYLRLELDTEFIGSARAIGKKHLSRIVEACFKTGAAPKASYVLDAIKERGYKYSTLAALTTSVFDMKIPEEKEDIVNNAEAEVSKISKKYARGLLNEEERYLAVISQWDTATDKVAGLLKKQGEEDKFNPIWMMADSGARGSIDQIKQLSGMRGLMVNPQGKKIEVPVKSCFRNGLSVLEYFISSHGGRKGLTDTALKTADSGYLTRRLVDVSHEIIVREDDCYAGRKPQGMKVRAIFGSDGREIEGLKDRLTGRFAAENVVNPATGEIMVGQNEFITEELAKEICDAGISEVSIRSIFTCNSRFGVCAKCYGKNMATTLPVQVGEAVGTIAAQSIGEPGTQLTMRTFHTGGIAATGDITQGLPRVEELFEVRKPKGCATICEVEGIIDLDDSDGSKHIKILDEATKEVKKEYSLPFNAEIKVKKGDKVVPGVLLNTGSVYPQDILRVQGVKGVQDYLLEQVQSVYRSQGVDINDKHIEIIVRQMLKKVRVESSGDTDLLPGELVDMVTFQDECAKAMQKGGAPALAKRVLLGITKASLATDSFLSAASFQETSRVLTEAAIRTKRDYLVGLKENVIIGKLIPAGTGMKEYKGLSPQFVGNYKDAEASVSEEISASVPYEKPTASLTEETAPISAESSVEDMLI*