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L3_131_368G1_scaffold_1382

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_131_368G1_scaffold_1382_1
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..848)
-----------------
DNA (846bp)
protein (282aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ7_9FIRM
cell division protein
L3_131_368G1_scaffold_1382_2
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(845..1279)
-----------------
DNA (435bp)
protein (145aa)
Transcriptional regulator, MarR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ6_9FIRM
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF67030.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
MarR family transcriptional regulator
L3_131_368G1_scaffold_1382_3
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1392..1958)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67029.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1382_4
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2089..2667)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67028.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
L3_131_368G1_scaffold_1382_5
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(2815..4101)
-----------------
DNA (1287bp)
protein (429aa)
Efflux ABC transporter, permease protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ3_9FIRM
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EEF67027.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_6
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4088..4807)
-----------------
DNA (720bp)
protein (240aa)
ABC transporter, ATP-binding protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEF67026.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_7
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4804..6510)
-----------------
DNA (1707bp)
protein (569aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAJ1_9FIRM
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EEF67025.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
RND family efflux transporter, MFP subunit
L3_131_368G1_scaffold_1382_8
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6729..9011
-----------------
DNA (2283bp)
protein (761aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAI9_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EEF67023.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_9
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9143..10171)
-----------------
DNA (1029bp)
protein (343aa)
Transcriptional regulator, MerR family n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAI8_9FIRM
Transcriptional regulator, MerR family {ECO:0000313|EMBL:EEF67022.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
SoxR; putative transcriptional regulator
L3_131_368G1_scaffold_1382_10
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10456..12267
-----------------
DNA (1812bp)
protein (604aa)
Flavocytochrome c n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAI7_9FIRM
Flavocytochrome c {ECO:0000313|EMBL:EEF67021.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein
L3_131_368G1_scaffold_1382_11
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12520..13389
-----------------
DNA (870bp)
protein (290aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAI5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67019.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_12
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13490..14902
-----------------
DNA (1413bp)
protein (471aa)
Serine carboxypeptidase n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAI4_9FIRM
Serine carboxypeptidase {ECO:0000313|EMBL:EEF67018.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
serine carboxypeptidase family protein
L3_131_368G1_scaffold_1382_13
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15085..15645)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAH8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67012.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_14
Holdemania filiformis, Holdemania, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15734..16051)
-----------------
DNA (318bp)
protein (106aa)
Uncharacterized protein n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YAH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEF67011.1}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;"
hypothetical protein
L3_131_368G1_scaffold_1382_15
unknown

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16476..16787
-----------------
DNA (312bp)
protein (104aa)

This feature has no annotations

Displaying 15 items

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