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L3_131_368G1_scaffold_1806_6

Organism: dasL3_131_368G1_concoct_60_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 2
Location: 3756..4562

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.1
  • Coverage: 268.0
  • Bit_score: 538
  • Evalue 3.70e-150
tRNA pseudouridine synthase A n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y957_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 268.0
  • Bit_score: 538
  • Evalue 2.70e-150
truA; tRNA pseudouridine synthase A similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 248.0
  • Bit_score: 227
  • Evalue 2.80e-57

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 807
ATGAAGCAGCGGTTCAAGGCGGTCGTCAGCTACGATGGCTTTGATTATGCCGGTTGGCAGATCCAGCCGGCCGAGCGCGGAGCGACGATTCAACAGACAATTCAGGACGCGATCAGCGTCATTTGTCAGCAGCCCGTGTCCATCACGGGCTCCGGTAGAACGGATGCCCAGGTCCATGCCTGGGGACAGGTTTTCCACTTTGACGTCGATTTCTCACTCAACGCTTTCCAATGGAAGCGGGCAATCAACGGCCATCTGCCGAAAGATATCCACATCCGTTCGATCGAGGCTGTCGATTCGCGTTTTCATGCCCGTTTTGACGCCATTGGAAAACGGTATGAATATCGGATACAGCTGGGAGAGGCAAACGTATTTACCCGCCGTTATGCCTTTCAGTCACCCTGGACGTTAAATGTTCAGGCGATGCGCGAAGGCGCGGCTTATCTGATTGGCGAGCATGATTTTTCTTCCTTCTGCGCAAATTCCCGGGCTGAAATGCCGGATCAGGTGCGGACGATTACCCGCCTGGAGCTGGCTGAGGAAAATGATCAGCTGCGCCTGATTTTTGAAGGCAGCGGGTTTCTGCGGTATATGGTGCGAATGATGACTGGCACGTTGATTGAAGTGGGACGCGGACGGCTGGCGCCGCAGGATGTGCAGTGGATGCTGCAGGCTCAGGATAAACAGATCTGTCACTTCAATGCGAAACCGCAGGGGCTGACCTTAGTTGAAGTCTATTATCCAGCAGCCGCGGCGGAGGCTCCGTCGGACGATTCTGCCTTAAATAGGAAACAAAAAGAAAAATAG
PROTEIN sequence
Length: 269
MKQRFKAVVSYDGFDYAGWQIQPAERGATIQQTIQDAISVICQQPVSITGSGRTDAQVHAWGQVFHFDVDFSLNAFQWKRAINGHLPKDIHIRSIEAVDSRFHARFDAIGKRYEYRIQLGEANVFTRRYAFQSPWTLNVQAMREGAAYLIGEHDFSSFCANSRAEMPDQVRTITRLELAEENDQLRLIFEGSGFLRYMVRMMTGTLIEVGRGRLAPQDVQWMLQAQDKQICHFNAKPQGLTLVEVYYPAAAAEAPSDDSALNRKQKEK*