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L3_131_368G1_scaffold_1870_2

Organism: dasL3_131_368G1_concoct_60_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 2
Location: comp(379..1104)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9YC99_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 477
  • Evalue 6.50e-132
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 477
  • Evalue 9.20e-132
sporulation sigma factor SigF similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 235.0
  • Bit_score: 221
  • Evalue 1.40e-55

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 726
ATGAATGATCAGCAGGAATTCTTCGATCTTCTGCATCAGGCCCAGCAGGGCGACGAACAGGCCCGGGAACAGTGTGTGCTGCGCAACGTCGGACTGGTCTGGTCGATCGTCAACCGCTTCAAGACGCATTCTTCGGCTCAGGACTTGTTTCAAATCGGATGCCTGGGTTTGATGAAGGCGATCAACAACTTCGATACCAGCTATAACGTGATGTTCTCAACCTATGCCGTGCCGATCATTCTCGGTGAGATCAAGCGTTATTTTCGCGACGAAGGTCAGATGAAAATTTCCCGATCGCTGAAAGAACGTTACCTGCAGGTTCAGAAAAGCCGCGAACGGCTGGCGCAGAAGCTGCAGCGGGAACCGACGTACCGGGAGATCGGCGAGGATTTAGGCGTGGAGGAAAACGACGTCATGTTAGCGATGGAAGCGAACCAGTTTCTGGCTTCGATGGACGAGGCGTTTTATCAAAAAGACGGTTCGACGATTAAGCTGGAAGATAAGGTCGAAGACCGGCATGGCGAAGATGTGCCGATGAAGCTGGCGCTGAAAAAGGAGATCGGGCATCTGGAACAGCGCGAACAGTATCTGATTTACCTGCGCTATGAATTGGAATATAATCAGGAAGCGATCGCTAAAAAAATGGGGATCTCGCAGGTTCAGGTGTCGCGGCTGGAAAAGAAAATTCTGAACAAGCTGAAATGTAAACTGACAGAGGACGCATGA
PROTEIN sequence
Length: 242
MNDQQEFFDLLHQAQQGDEQAREQCVLRNVGLVWSIVNRFKTHSSAQDLFQIGCLGLMKAINNFDTSYNVMFSTYAVPIILGEIKRYFRDEGQMKISRSLKERYLQVQKSRERLAQKLQREPTYREIGEDLGVEENDVMLAMEANQFLASMDEAFYQKDGSTIKLEDKVEDRHGEDVPMKLALKKEIGHLEQREQYLIYLRYELEYNQEAIAKKMGISQVQVSRLEKKILNKLKCKLTEDA*