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L3_131_368G1_scaffold_996_22

Organism: dasL3_131_368G1_concoct_60_fa

near complete RP 48 / 55 MC: 1 BSCG 50 / 51 ASCG 13 / 38 MC: 2
Location: comp(21241..23835)

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=545696 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Holdemania.;" source="Holdemania filiformis DSM 12042.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 864.0
  • Bit_score: 1687
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Holdemania filiformis DSM 12042 RepID=B9Y5N4_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 864.0
  • Bit_score: 1687
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 50.3
  • Coverage: 862.0
  • Bit_score: 866
  • Evalue 5.10e-249

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Taxonomy

Holdemania filiformis → Holdemania → Erysipelotrichales → Erysipelotrichia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 2595
GATGACAACAGCTCGCTGATCGACTACTGTCCTAAAGCTCAGGTTTTCCTGTCCCATCCCGATCAGATTAAAACCCATCTTCACCAACTGAGCGAGGAAACGACAGCCTATATTCAGGAAATGACACAGGAGCTGAAAATGCTGCCGCGCTTTACCGTCCAGCATGAATTAAACACTGTGCTTGCCGGCCGCAAGATCACGGAAATCGACAGCTTCGATTCGCTGCGCAAGGTTCCGCACGCAATGATCCGCGAGGTTGCGCTGCCCAATGAAACGCTGGCGATGAAGCTGGAAATCGCCCTGAAGGAAGGTCGCGGACGTCAGCTGTATTTCTTCTTGCAGGAACACGAGCTGAAGGAAGTCGTGCCGATCCTCAAAGGCAAGGAAATTCCTTTCCTGATTGATGACTTTAAGCCGCGCGACGAAGGTCTGGTGCTGATTCATCAGGCGCTGGACGAAGGGTTTGAGGCGCTTAAGGAAAACTTTGTCGTCTACACTTCCCATGAACTATTTAAGAAAAAGACCAAGCTGGGCCGCTACGCCTCCAAGTTTAAGGAAGCCGAAGCGCTGAACAGCTATCAGGAGCTGCAGCCGGGTGATTTTATCGTTCATTCCCAACACGGCGTCGGGCAATACCTTGGAATTGTGACCCGTGAGTTCAACGGCGTGCATAAAGATTTCCTGCGTGTTGTCTACAAGGGCAACGACGAGCTGTTAGTACCGCTGGAACAATTCCGTCTGGTGCGTAAATTCGTCTCCCGCGAAGGCGTGGTGCCGAAGCTGAATAAGCTGGGCAGCCATGATTGGGAAAAGACCAAGCAGCGGTTAAAAGACAATGTCAACGAGATTGCCGACCGCCTGGTCAAGCTGTATTCCCAGCGCGAAGAAAACATCGGCTACGCTTATGGGCCGGATACTCCGCTCCAACAGGAATTCGAAGATGATTTTGATTACGACCTGACGCCTGATCAGGCGCTGGCCGTGCAGGAAATCAAAAAAGACATGATGCAGCCCAAACCGATGGATCGTCTGTTGTGCGGCGACGTTGGCTTTGGCAAGACTGAGGTCGCTCTGCGGGCTGCGTTCAAGGCAATTACCGAGGGCAAGCAGGTCGCGTTTTTGTGTCCGACCACGATTCTTTCCCTGCAGCACACCGCCACGGCCATGAAGCGTTTTGAAAACTTCCCGATCCGCGTCGAAGTCCTCAACCGGTTTGTCGTGGAGTCCAAACAGAAGGAAATTCTGCGCGAACTCAAGGAAGGGAAGGTCGATATGATCATCGGCACGCACCGGATTCTGTCCAAAGACGTGCAGTTTCATGACCTCGGGCTGTTGGTCATCGACGAAGAACAACGCTTCGGAGTTGAACACAAGGAAAAGATCAAGGAAATGAAGGAATCCATCGACGTGCTTTCACTTTCCGCCACGCCGATTCCACGCACCTTGCAGATGTCGCTGATCGGCATCCGCTCCTTGTCCCAGCTGGAAACCCCGCCGAGCAACCGGATGCCTGTGCAGACCTATGTCATTGAGAAAAACCGGGCGTTAGTCAAGGAAGTCATCGAGCGCGAGCTGGCCCGGCAGGGGCAGGTGTTCTACCTGTTCAACAACATCCAGGAAATCTACAATGTCGCCCGCCAGATCAAGCAGGATGTGCCGGAAGCGGAAATCGCCGTCGCGCATGGCAAGATGAGCCGCGATGAAATTGAGGAAGTCATGATGCAGTTCACGGATAACGAAGTGAACGTGCTGATCTGCACGACGATCATCGAAACCGGCATCGACATTCCCAACGCCAACACGATTCTGATTGAAAACGCTGATACCTTCGGTCTGGCGCAGCTCTATCAGATCAAAGGCCGGGTCGGCCGCAGCGACCGTATCGCTTATGCCTATCTGATGGTGCGTCCGCGCAAGCAGGTGAACGAGATCGCGCAGAAGCGCTTGCAGGCGATCAAGGAATTCACGGAGCTGGGCAGCGGCTATAAGATCGCAATGCGGGATTTGACGATCCGCGGCGCCGGCGATTTGTTAGGCCCGAGCCAGTCCGGTTTCATTGACACTGTGGGGATTGATATGTATATTGAAATGCTGCAGGAAGCCATCGCCGAGAAGAAAGGCGAAGTCAAACCGGAGGTCAAGGAACCTGTCCGCGCGCAGGTTCAGGTTGACGGCTACATTCCGAAGCAGTTTGCGCCGCTGGATTTTGAGAAAATTTCGCTCTATCAGCGGATTGACGCGACGGCGGATGAAGCGCAGCTCATGGCGCTGAAAGAAGAAACGCAGGATTATTTTGGGAAAATGCCGAAATCCGTCGGCTTGTTGTTTGAGAAGAAACGACTCGATATCCTGTTGAACGAACCGCGGATCGATTCTTTCCGCGACGTTAAAAACCAGATGGAAATCGTCTTCTCCAAAGCCTTTTCCGATCATATCGACGGCGTGAAATTATTTGAAACCTTCACCACGATTTCCAAGGATATTCAGCTCCGGTATGTGCAGGGCAAGATTATTGTCCGGCTTCCGAAAAAAGGAAATGAACTGGCATTGGCGATCGAAGTGTTGGATCAAAGTAAGAAACTGGAAGTTTCATAG
PROTEIN sequence
Length: 865
DDNSSLIDYCPKAQVFLSHPDQIKTHLHQLSEETTAYIQEMTQELKMLPRFTVQHELNTVLAGRKITEIDSFDSLRKVPHAMIREVALPNETLAMKLEIALKEGRGRQLYFFLQEHELKEVVPILKGKEIPFLIDDFKPRDEGLVLIHQALDEGFEALKENFVVYTSHELFKKKTKLGRYASKFKEAEALNSYQELQPGDFIVHSQHGVGQYLGIVTREFNGVHKDFLRVVYKGNDELLVPLEQFRLVRKFVSREGVVPKLNKLGSHDWEKTKQRLKDNVNEIADRLVKLYSQREENIGYAYGPDTPLQQEFEDDFDYDLTPDQALAVQEIKKDMMQPKPMDRLLCGDVGFGKTEVALRAAFKAITEGKQVAFLCPTTILSLQHTATAMKRFENFPIRVEVLNRFVVESKQKEILRELKEGKVDMIIGTHRILSKDVQFHDLGLLVIDEEQRFGVEHKEKIKEMKESIDVLSLSATPIPRTLQMSLIGIRSLSQLETPPSNRMPVQTYVIEKNRALVKEVIERELARQGQVFYLFNNIQEIYNVARQIKQDVPEAEIAVAHGKMSRDEIEEVMMQFTDNEVNVLICTTIIETGIDIPNANTILIENADTFGLAQLYQIKGRVGRSDRIAYAYLMVRPRKQVNEIAQKRLQAIKEFTELGSGYKIAMRDLTIRGAGDLLGPSQSGFIDTVGIDMYIEMLQEAIAEKKGEVKPEVKEPVRAQVQVDGYIPKQFAPLDFEKISLYQRIDATADEAQLMALKEETQDYFGKMPKSVGLLFEKKRLDILLNEPRIDSFRDVKNQMEIVFSKAFSDHIDGVKLFETFTTISKDIQLRYVQGKIIVRLPKKGNELALAIEVLDQSKKLEVS*