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L3_133_000G1_scaffold_2_5

Organism: dasL3_133_000G1_concoct_81_fa

near complete RP 50 / 55 MC: 2 BSCG 51 / 51 MC: 1 ASCG 13 / 38
Location: 5731..6981

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor SigA n=3 Tax=Lactobacillus rhamnosus RepID=G7V0V7_LACRH similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 799
  • Evalue 1.30e-228
sigA; RNA polymerase sigma factor rpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 799
  • Evalue 3.70e-229
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 416.0
  • Bit_score: 799
  • Evalue 1.80e-228

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Taxonomy

Lactobacillus rhamnosus → Lactobacillus → Lactobacillales → Bacilli → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1251
ATGGCTGATAAAAAAACAGCAACTGAAGTAAGCAAGACCACAAAGAAGACAACGGCTGCAGCTTCAACCAAAGCAGCAACCGAATCAAAGGCTGCGACCAAGAAGACCGCAACCAAGAAAACAACGGCCAAGAAGACTACCGCTAGCAAGAGTCACACAACGACTAAGGCTTATGATGATGCCGTCAAAGCTGTCATCAAAGATTATAAGAAGAAAAAGCAGATCACCGAAGACGATTTAACCTCTAAACTGATCAAGCCATTTGAGCTAAAGAGTACCGCCATCGATGATTTAATGCAGAAAATCGAAGACAACGGGATCGCGATTGTTGACGAAAACGGCGAACCGGCCACGATCAGCCTCAAGAAGCAAAAAAAGGTTTCCAAGAAGGAAATGAGCGATATGTCCGCGCCATCCGGGGTTAAGATTAACGACCCAGTGCGGATGTATCTTAAGGAAATCGGCCGGGTTTCATTGCTGACCGCTGATGAAGAAGTTGCCCTTGCTTTGAAGATCGAACAAGGTGATCAAGAAGCCAAGCAACGACTGGCCGAAGCTAACTTACGACTGGTGGTTTCTATTGCTAAGCGCTACGTTGGTCGTGGCATGCAGTTTCTGGATTTGATTCAGGAAGGTAACATGGGCTTGATGAAGGCGGTCGAGAAGTTTGATTACCGCAAAGGCTTCAAGTTCTCCACCTACGCCACCTGGTGGATTCGGCAGGCGATCACCCGCGCGATTGCTGACCAAGCCCGGACGATTCGAATTCCTGTTCATATGGTTGAAACCATTAATAAACTGATTCGGATTCAGCGTCAACTGCTTCAGGATCTTGGCCGCGAACCAACTCCTGAAGAAATCGGTGCCGAGATGGATATGCCAACCGAAAAAGTCCGCGAAATTTTGAAGATCGCCCAAGAGCCAGTGTCCTTGGAAACGCCAATCGGTGAAGAGGACGATTCACACCTCGGCGACTTCATTGAAGACCAAGACGCTACCAGTCCAGAAGATCACGCTTCCTACGAATTGCTCAAGGAACAGTTGGAGAGCGTGCTTGACACTTTGACTGACCGCGAAGAAAATGTTTTGCGGCTGCGCTTTGGACTTGACGATGGCCGGACCCGCACGCTGGAAGAAGTCGGCAAAGTCTTTGGCGTGACCCGTGAACGCATTCGTCAGATTGAAGCCAAGGCATTGCGGAAACTCCGCCACCCGAGCCGTTCCAAGCAGCTTAAGGATTTTCTTGAATAA
PROTEIN sequence
Length: 417
MADKKTATEVSKTTKKTTAAASTKAATESKAATKKTATKKTTAKKTTASKSHTTTKAYDDAVKAVIKDYKKKKQITEDDLTSKLIKPFELKSTAIDDLMQKIEDNGIAIVDENGEPATISLKKQKKVSKKEMSDMSAPSGVKINDPVRMYLKEIGRVSLLTADEEVALALKIEQGDQEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVEKFDYRKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRIQRQLLQDLGREPTPEEIGAEMDMPTEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDATSPEDHASYELLKEQLESVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE*