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sw_8_scaffold_2179_2

Organism: SW_8_Viridiplantae_55_9

partial RP 28 / 55 MC: 12 BSCG 18 / 51 MC: 4 ASCG 13 / 38 MC: 2
Location: comp(384..3959)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=296587 species="Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; M similarity UNIPROT
DB: UniProtKB
  • Identity: 63.3
  • Coverage: 999.99
  • Bit_score: 1441
  • Evalue 0.0
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 38.8
  • Coverage: 999.99
  • Bit_score: 790
  • Evalue 8.30e-226
DNA-directed RNA polymerase n=1 Tax=Micromonas sp. (strain RCC299 / NOUM17) RepID=C1FIF0_MICSR similarity UNIREF
DB: UNIREF100
  • Identity: 63.3
  • Coverage: 999.99
  • Bit_score: 1441
  • Evalue 0.0

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Taxonomy

Micromonas sp. RCC299 → Micromonas → Mamiellales → Mamiellophyceae → Chlorophyta → Viridiplantae

Sequences

DNA sequence
Length: 3576
GGCACCTGCTCCGCCTCCATCCGCTCCCAGTCTTTCCTCTCTCAATGGATGGAGAGCGGAGGGCGGAGCGACGATGCTGCAGAGGGTGGATCAGCCCGACTGCAGGGCCGGTCCGGGCCGCAGGCCTTCCGAAGCGAATGCACGAATGCCGGTCACACCCGATCAAGCGGCGCTGAGGCAGTTGTGCGCGGCGCCACCAGCAGCAAGTATGAGCTGCTGCCTGCGTTCCTCCGCACCAGAGGCCTTGTGAAGCAGCACATTGACAGCTTCAACTGGCTTGTTCACTCGGAGCTGAAGAAGATCATCCATGCCAAGAACAACCACACAGTCAAGTGCGACGCCGACCCCAACTTCCACATTCGCTACCTTGACATCCGCGTCGACTTTCCCAGCGTGCCGGAAGAGCATAGCGGCACCCGCGCCACCACGCCTCAGGAGTGCCGCCTCCGCGACCTCACCTACGCCGCCCCCATCTTCGTCGACCTCGAATATCCCGCCAACGGCGTGTTCGAAGTTAAGCGCAACGTCCAGATCGGCCGCATGCCTATCATGCTTCGCTCTGACAAGTGCGTGCTCTCCAACAAGGATGAATCTGAGAAGATGCGTTGTGGTGAGTGCCCGCTTGACCCTGGTGGCTACTTCGTCGTGAAAGGTGCCGAAAAGGTGCTGCTTATCCAGGAGCAGCTGAGCAAAAATCGCATCCTGATTGACCGAGAAAGCACAGGCGTGCCGCTCGCTTCAGTGACGTCGTCCACCCACGACCGTAAATCGAAGACAAATGTTGTCACGAAGAAGGACTGCCTCTACCTGAAGCACAACACATTCGCTGAAGACATCCCCGCCATCATCACGCTGCGCGCTATGGGTGTTGAAACAGACCAAGAGGCCATGCAGCTTGTTGGGCCCGAATATTCCGTTGAAAGCATGCTAGCGCCCTCCATCCGCGAGTGCGCGCATCAAGGCGTGTACACCTGTCAGGAGGCGCTTGAATACGTCGGAAGCCGTGTGCGCTCCAGCGCGTCTGCTCGTGCCGCAGCGTTCGGTGGTAACAAAGGGATGAAGAAGTCGAAGGATGAGGAAGCACGAGATGTTCTCGCAATGGTTGTGCTGGCGCATGTCCCCGTTCCACAGTACGACTTCACACAGAAGCGTGCGTACCTTGCTGTTATGATGCGGCGTTTGCTCGCTGCGATGGCTGATCCGTCCCAGGTTGATGATCGAGACTACTACGGTAACAAGCGCCTGGAGCTCGCCGGTGGCTTGCTGGCGCTCCTCTTTGAGGATCTCTTTAAGCGAATGAACTCGGACCTGAAGCGTCAAGCCGAAGCGGCACTTAGCAAGAAATCGACTGGCAGAGGTGGCTCAAGCTCGATTGATCCGACGAGATGGATCCGCCAAGACACGCTCACGCACGGACTCGAGCATGCAATTAGCACTGGAAATTGGACTGTGAAGCGCTTCCGGATGGAACGAAAGGGCGTGACTCAGGTGCTCTCACGCTTGAGCTTCGTTTCTGCTCTTGGCATGATGACACGGATCACGAGCCAGTTTGAAAAGACGAGGAAGGTTTCAGGACCACGTGCGCTGCAGCCGTCCCAGTTTGGTATGCTGTGCCCCTCCGACACACCTGAAGGGGAATCGTGTGGCCTTGTGAAGAATCTCTCGCTGCTGACACACGTGACAACGGACGCAGACGAGGAACCTCTTCGGAGAGCAGCTTTCTCGCTAGGGGTCGAGTCGCTATTCATGTGCGTTGGTGAGTCGCTGCATTCGCCGTACACAACGCGCATCTTTTTAAATGGCTTGCTTATTGGGTTGCACCGACATCCGCACAAATTTGCGCGGAACTTACGCGAATTAAGACGAGGCGGGCGTCTGGGTGAGTTTGTGAGCGTACACCAGGGGGAGGACTTTGTGTCAATTAGCGGTGATGGTGGGCGAGTATGCCGACCCTTAGTCGTTTGTGATCATGGCGAGCCACTTGTGAAGGATCATCATCTACGGGAACTACGCTTAGGGAGAAGAGCCTTCAGCGACTTCCTTAAGGATGGCTTCGTTGAGTATCTCGACGTGAACGAAGAATCAAACGCACGCATTGCGCTATATGAGAGTGGATTGTCATCAGAGCACACACACATTGAGATTGAGCCATTCACTATCTTAGGGGTATGTGCTGGTTTAATCCCTTATCCACATCATAACCAGTCACCACGCAACACGTATCAGTGCGCCATGGGCAAGCAAGCGCAAGGCGCCGTCGGGTACAACCAAAACAGTCGTATGGACACTTTGCTCTACCTGCTCAACACACCTCAAAAGCCACTGGTGAAGACAAAGACGCTCGATCTCATCAACTTCGACCGCTTAGGCGGCGGACAAAACGCCACTGTGGCAGTGATGTGCTATGCCGGATATGATATTGAGGATGCCTTGATCTTCAACAAAGCTTCGATCGACCGCGGTCTTGGACGAGTGACAGTGCTACGAAAGCAATCGGCGCAGCTGAAGAAGTACCCGAATCGAACGAGCGACAGATTGGTTCAACCAGGCTATATTAAGAGCGGAAAGGGAAATCCGCAGCAGCTCGAGCAGGACGGCATCTGTGGCGTTGGGACGCCGCTCTCTACGGGCGATGTGTACGTTAATAAGCAGACGCCCGTCAACACGAGTGACCCTGTCAAGCAAATCGAAGTTCCGGACGCAGACTACAAGCCAGCTGCGTCGATATTCAAAGGCGACAATGAGTCTACTGCGTATGTGGATCAGGTGCTCTTGACAAACGGTGAAGAGGGACAGATGGTGATTAAGACGCTTCTACGAAACACGCGCAAGCCTGAGGTTGGCGACAAATTCTCATCAAGGCACGGGCAGAAGGGTGTGATCGGACATATCGCTGAACAAGAGGACTTGCCATTCACCGATGAAGGCATCGTGCCGGACATCATCATGAATCCGCACGGCTATCCATCGCGGATGACGGTCGGCAAGATGCTCGAGCTTGTTGGTGCTAAGGCGGGAGTTTGCAGCGGGCACTTCCACTACGGAACTGCATTTGGAGGCGATAGTGTGCAGCCGATGTCAGAGGAGCTCCAAAGCGCTGGATACTCCTTCAGCGGCAAGGAGTATCTCACCTGCGGCTTTACAGGGGAGCCTCTGAAGGCGTACCTCTTTGTCGGACCTGTATATTATCAAAAGCTAAAACATATGGTACTTGATAAGATGCATGCGCGTGCGAGGGGGCCACGCGTGGTGTTGACACGGCAGCCAACGGAAGGACGCTCGCGAGACGGTGGATTGCGCCTCGGTGAGATGGAACGTGACTGCTTGATTGCATACGGTACTGGAAACCTCATTCGAGAGAGGCTGATGGGCAGCAGTGATGAGTTCACGGTGAACGTGTGCGAAAAGTGTGGGCATATCGGCTACTACAGCTACAGCCTCAAGTGCGCCTTCTGCACAACGTGCCAGACAAGCAAACACATGAACAAGCTGCAGATCCCATATGCCTGCAAGTTACTTTTTCAGGAGCTCAACGCGGTCAATATCGTGCCGCGCATCTCGCTCGCCAACCAATGA
PROTEIN sequence
Length: 1192
GTCSASIRSQSFLSQWMESGGRSDDAAEGGSARLQGRSGPQAFRSECTNAGHTRSSGAEAVVRGATSSKYELLPAFLRTRGLVKQHIDSFNWLVHSELKKIIHAKNNHTVKCDADPNFHIRYLDIRVDFPSVPEEHSGTRATTPQECRLRDLTYAAPIFVDLEYPANGVFEVKRNVQIGRMPIMLRSDKCVLSNKDESEKMRCGECPLDPGGYFVVKGAEKVLLIQEQLSKNRILIDRESTGVPLASVTSSTHDRKSKTNVVTKKDCLYLKHNTFAEDIPAIITLRAMGVETDQEAMQLVGPEYSVESMLAPSIRECAHQGVYTCQEALEYVGSRVRSSASARAAAFGGNKGMKKSKDEEARDVLAMVVLAHVPVPQYDFTQKRAYLAVMMRRLLAAMADPSQVDDRDYYGNKRLELAGGLLALLFEDLFKRMNSDLKRQAEAALSKKSTGRGGSSSIDPTRWIRQDTLTHGLEHAISTGNWTVKRFRMERKGVTQVLSRLSFVSALGMMTRITSQFEKTRKVSGPRALQPSQFGMLCPSDTPEGESCGLVKNLSLLTHVTTDADEEPLRRAAFSLGVESLFMCVGESLHSPYTTRIFLNGLLIGLHRHPHKFARNLRELRRGGRLGEFVSVHQGEDFVSISGDGGRVCRPLVVCDHGEPLVKDHHLRELRLGRRAFSDFLKDGFVEYLDVNEESNARIALYESGLSSEHTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAQGAVGYNQNSRMDTLLYLLNTPQKPLVKTKTLDLINFDRLGGGQNATVAVMCYAGYDIEDALIFNKASIDRGLGRVTVLRKQSAQLKKYPNRTSDRLVQPGYIKSGKGNPQQLEQDGICGVGTPLSTGDVYVNKQTPVNTSDPVKQIEVPDADYKPAASIFKGDNESTAYVDQVLLTNGEEGQMVIKTLLRNTRKPEVGDKFSSRHGQKGVIGHIAEQEDLPFTDEGIVPDIIMNPHGYPSRMTVGKMLELVGAKAGVCSGHFHYGTAFGGDSVQPMSEELQSAGYSFSGKEYLTCGFTGEPLKAYLFVGPVYYQKLKHMVLDKMHARARGPRVVLTRQPTEGRSRDGGLRLGEMERDCLIAYGTGNLIRERLMGSSDEFTVNVCEKCGHIGYYSYSLKCAFCTTCQTSKHMNKLQIPYACKLLFQELNAVNIVPRISLANQ*