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cn_combo_scaffold_34_2

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 760..2490

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI000374948E similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 576.0
  • Bit_score: 710
  • Evalue 1.40e-201
Methyl-accepting chemotaxis protein I (Serine chemoreceptor protein) {ECO:0000313|EMBL:CDS50377.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 588.0
  • Bit_score: 639
  • Evalue 3.30e-180
methyl-accepting chemotaxis sensory transducer similarity KEGG
DB: KEGG
  • Identity: 63.3
  • Coverage: 575.0
  • Bit_score: 635
  • Evalue 1.30e-179

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Taxonomy

Polaromonas sp. CG9_12 → Polaromonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1731
ATGAATTTGAAGAATCTGAAAATCGGCACCCGCCTGGGCTTCGGCTTCGCGGTGGTGCTGCTGCTGATGGCGGTCATCGCCGCCACGGGCATGCTGCGCCTCGGGAAGGTGGGCAAGGCCACGGAGGAGGTGATGGAGCGCGCGCTGGTCAAGGAGCGCCTGGCCAACCAGTGGTCCAACCTGCTGGGGCCGGCCATCGTGAACTCGTTCGCGATGGTCAAGGCGACCGATCCCAAGGTGGCGGCCTACTTCGAGAAGGGCCGGGCGGAAAAGTCGGCACAAATCAATCCGGTGCAGAAGAAGCTCGAGGAACTCCTGACCTCCCCGGAAGAAAAGAAGTTGTACGCCAACGTGGCCGATGCTCGCGCCATCGTGCTGCAGAGCATCGGGCAGATCAACAAGCTCAAGTCGGAAGGCAAGAACGAGGAGGCCATGGACATGGCCGACAACAAGTTCGCGCCCGCGCTGGCCGTCAACGAAGAAGCCGTCGCCAAGCTCGCGGCATACCAGCGTGACCGCATCGACGAACTGGCCAAGGGCATCGAGGCCGACCATTCGAGCGGCGAGACGCTGCTGCTGGCGCTGTCGGGCATCGCATTGCTGCTGGGCGCGCTGTTCTCCTGGCGGCTGACACTGGGCATCGTGCGCCCGCTGGGGCAGGCCGTGCAGGTGGCGGAGACGGTGGCCGCCGGCGACCTGAGCACGAACATCAAGGTGGAAAGCCGCGACGAGGCGGGCCAGCTGATGCAGGCGCTGAAGAACATGAACGAGAGCCTGGCCAAGGTGGTGGGCGAGGTGCGCACGGGCACGGAGACGATCGCCACGGCGTCGGGGCAGATCGCCTCGGGCAACCAGGATCTGTCTTCGCGTACCGAAGAGCAGGCCAGCTCGCTGGAGCAGACGGCCGCCTCGATGGAGGAACTCACCAGCACGGTGAAGCAGAACGCGGACAACGCGCGTCAGGCGAACCAGTTGGCGATGTCGGCTTCCGAAGTCGCCGTGAAGGGCGGCAGCGTCGTTTCCCAGGTGGTGGACACCATGGGTTCGATCAATGCGTCGTCCAAGAAGATCGTCGACATCATCGGCGTGATCGACGGTATCGCATTCCAGACCAACATCCTGGCGCTGAACGCGGCCGTGGAAGCCGCTCGCGCAGGCGAACAAGGCCGCGGCTTCGCGGTCGTGGCATCGGAGGTTCGCAACCTCGCACAACGCTCGGCTGCGGCGGCCAAGGAAATCAAGACCCTCATCGGCAACTCCGTGGAGAAGGTCGAAGAGGGCAGCAAGCAGGTGGAAGAGGCCGGCCGCACCATGGATGAGATCGTCGGCAGCGTGAAGCGCGTGACCGACATCATGGGCGAGATCACCGCAGCGAGCCAGGAACAGACCTCCGGCATCGAACAGATCAACCAGGCCATCACGCAGATGGACCAGGCCACGCAGCAGAACGCGGCGCTGGTCGAGGAAGCCTCGGCGGCGGCGCAATCGCTGCAGGAGCAGGCCGGAAGCCTCGTGCAGGCGGTCAGTGTCTTCAAGCTGGACGCCAATGCGGTTGCCACCGTGCGCCCGGGTTTCACCCGCATCACCCCCATTCCCAAGACTGCCAGGCCGGCGCCGGCGGCGGCCAAGCGGCCCGCCAAGGCGCTTCCCGCGCGGCGGGAGCCGGGCGGCGCCGCCGCGCCGCAGCTGGCCATGGCCGGCGACGCCAAGGGCGACTGGACAGAGTTCTGA
PROTEIN sequence
Length: 577
MNLKNLKIGTRLGFGFAVVLLLMAVIAATGMLRLGKVGKATEEVMERALVKERLANQWSNLLGPAIVNSFAMVKATDPKVAAYFEKGRAEKSAQINPVQKKLEELLTSPEEKKLYANVADARAIVLQSIGQINKLKSEGKNEEAMDMADNKFAPALAVNEEAVAKLAAYQRDRIDELAKGIEADHSSGETLLLALSGIALLLGALFSWRLTLGIVRPLGQAVQVAETVAAGDLSTNIKVESRDEAGQLMQALKNMNESLAKVVGEVRTGTETIATASGQIASGNQDLSSRTEEQASSLEQTAASMEELTSTVKQNADNARQANQLAMSASEVAVKGGSVVSQVVDTMGSINASSKKIVDIIGVIDGIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAKEIKTLIGNSVEKVEEGSKQVEEAGRTMDEIVGSVKRVTDIMGEITAASQEQTSGIEQINQAITQMDQATQQNAALVEEASAAAQSLQEQAGSLVQAVSVFKLDANAVATVRPGFTRITPIPKTARPAPAAAKRPAKALPARREPGGAAAPQLAMAGDAKGDWTEF*