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cn_combo_scaffold_34_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2586..4550

Top 3 Functional Annotations

Value Algorithm Source
flagellar hook protein FlgK n=1 Tax=Variovorax paradoxus RepID=UPI0003728620 similarity UNIREF
DB: UNIREF100
  • Identity: 86.1
  • Coverage: 654.0
  • Bit_score: 1093
  • Evalue 0.0
flgK; flagellar hook-associated protein 1 FlgK similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 651.0
  • Bit_score: 921
  • Evalue 1.30e-265
Flagellar hook-associated protein 1 FlgK {ECO:0000313|EMBL:AGU51415.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 651.0
  • Bit_score: 921
  • Evalue 6.50e-265

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1965
ATGTCCGGAAGCATGTTCTACACAGGTCTGAGCGGCCTCGGCGTCGCCCGCGCCGCGCTGATGACCACGGCTCACAACACCGCCAACGTCTACACGGCGGGCTACAGCCGCCAGGTGGCCGAGATCGCCACGGGCGGCGCCATTTCCAGCGGCTCGGGTTACATCGGCACGGGCGCCAACGTCACGACCGTCTCGCGCAGCTACGATCGCTACCTCACGGCGCAGCTCGCCAGCGCGCAGTCGAACTCGGTCGCGCTCGCCACCAACGGCACGCAGATCAACCGCATCGACACCCTGCTGGCCGACAAGACCTCGGGCATCTCGGCGCTGATGCAGAACTTCTTCACCAGCATCCAGGGCGTGGCCAACACGCCGGCCGACCCGGCCGCGCGCCAGCAGATGATCAGCTCCGCGCAGGCGCTGGCCAGCAAGTTCCGCTCGACCGACCAATACCTGTCGGACCTGAACACGTCGGTCAACGAGCAGATCGACGGCAGCGTCGAGCAGATCAACGTCTACGCCACCAAGATCGCCAGCCTGAACCAGCAGATCAGCCAGGCCACGGCCATGGCCAGCGGCCAGCCGCCGAACGACCTGCTCGACCAGCGCGACCTGCTCGTGAGCCAGCTGAGCCAGGTGGTCGACGTCAAGGTGCTGCAGCAGGACAACGGCAAGTACAACGTGTTCATCGCCACCGGCCAGTCGCTGGTGGTGGGCGACTACGCTTCCCAGATGGTCTCGGTCAACTCGGCCGCCGACCCCACCCGCAAGGTGGTGGCGCTCAAGGGCTTCGGCGGCAACACCGCCGAGCTCGACGACAGCACCTTCAAGGGCGGCGTGCTCGGCGGCCTCATGACCTTCCGCAGCGAAACCCTCATCCCCACGCAAAATTCCATCGGCCGGCTTGCCATGTCGGTGTCCGATGCGGTCAATGCCCAGCACAAGCTGGGTGTGGACCTGAACGGCGCGTTGGGCCAGAACTTCTTCAACCAGGCGGTGCCGGGCGTGATGTCCAACGCAAAGAACACAGGCAACCTCGAATTCGGTGCCACGCTGACCGATGCTTCGAAGCTCACCACCAGCGACTACGACGTCAGCGTCACCAACGTGGCGGGCACGCTCACCTACACGGTCACGCGCCTGTCGGACAAGACGTCGATGGGCAGCTTCACCACCTTCCCGATCACCTTCGACGGCGTGAGCCTCAATGCCGCCAGCGGCACGGCGCAGGCCGGCGACTCGTTCCTGGTGCAGCCGACCCGCACCGGCGCGCGCGACCTCGACGTGCTGGTGCGCGACCCCGCCAAGGTGGCGGCCGCATCGCCGCTGGTGACCGGCAACACCGCCGGCAACAAGGGCAACGCCGCGCTGAGCGCCGCGACGGTCGACGCCTCCTACCCCGGCACGCCGCTGGCAGGCCCGGTCACGCTGAGCTTCGACGCCGCCACGGGCACCCTGTCGGGCTTTCCCGCGACCTCCGCCGTCACCGTGACGCTGGCCAACGGCACCAGCACCACCTACGCGGCCGGCGCCGCGGTGCCCTACACCGCCGGCGCGAAGATGAGCTTCGACGGCGTCACGGTCAGCATGACCGGCGCGCCGTCGCAGGGCGACACCTTCACCATCAAGAACAACACCTCGGGCGTGTCCGACGGCAGCAATGCGCTGCTGCTGGGCGCACTGCAGCGCAAGACCACGATGGCCAACGGCACGGCGACCTTCAACGGCGCCTACTCGCAGCTGGTCAGCGAAGTCGGCAACCGGGCCATGGCGGTCAAGGTCGCGGCCGCCACGCAAGACAGCGTGACCGGCCAGATCAAGGCCAGCCAGCAGTCCGTCTCCGGCGTCGTCCAGGACGAGGAAACCGCCAACCTGCTGATGTTCCAGCAGATGTACCAGGCCAACGCCAAGGTGATCCAGACCGCATCGACCATGTTCGACGCGATCCTCGGCATCCGCAGCTGA
PROTEIN sequence
Length: 655
MSGSMFYTGLSGLGVARAALMTTAHNTANVYTAGYSRQVAEIATGGAISSGSGYIGTGANVTTVSRSYDRYLTAQLASAQSNSVALATNGTQINRIDTLLADKTSGISALMQNFFTSIQGVANTPADPAARQQMISSAQALASKFRSTDQYLSDLNTSVNEQIDGSVEQINVYATKIASLNQQISQATAMASGQPPNDLLDQRDLLVSQLSQVVDVKVLQQDNGKYNVFIATGQSLVVGDYASQMVSVNSAADPTRKVVALKGFGGNTAELDDSTFKGGVLGGLMTFRSETLIPTQNSIGRLAMSVSDAVNAQHKLGVDLNGALGQNFFNQAVPGVMSNAKNTGNLEFGATLTDASKLTTSDYDVSVTNVAGTLTYTVTRLSDKTSMGSFTTFPITFDGVSLNAASGTAQAGDSFLVQPTRTGARDLDVLVRDPAKVAAASPLVTGNTAGNKGNAALSAATVDASYPGTPLAGPVTLSFDAATGTLSGFPATSAVTVTLANGTSTTYAAGAAVPYTAGAKMSFDGVTVSMTGAPSQGDTFTIKNNTSGVSDGSNALLLGALQRKTTMANGTATFNGAYSQLVSEVGNRAMAVKVAAATQDSVTGQIKASQQSVSGVVQDEETANLLMFQQMYQANAKVIQTASTMFDAILGIRS*