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cn_combo_scaffold_34_6

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(7002..7799)

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis protein FliR n=1 Tax=Variovorax paradoxus RepID=UPI00036A1966 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 265.0
  • Bit_score: 463
  • Evalue 1.80e-127
fliR; flagellar biosynthetic protein FliR similarity KEGG
DB: KEGG
  • Identity: 75.3
  • Coverage: 263.0
  • Bit_score: 396
  • Evalue 7.80e-108
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 75.3
  • Coverage: 263.0
  • Bit_score: 396
  • Evalue 3.90e-107

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 798
GTGACGCCTTCGATCTTCTCCGTCACTTCGGGCCAGCTCGAGGGCTGGGTGGTGGCCTTCCTGTGGCCCTTCGTGCGCATGCTCGCGCTGGTGAGCACCGCGCCGATCTTCGCGGAGTCGTGGGTTCCCAGGCAGGTCAAGGTGGGCATCGCCGCCATGCTCACGCTGGTGATCTCGCCGCTCATCGGGCCGTTTCCGGCGGTGCCCGTGGTGTCCGCCGGGGGCCTCTGGATCATCGTGCAGCAGGTGCTCATCGGCGTGGCCATGGGCTTCGCGATGCGGATGGTGTTCACCGCCGTGCTGGCCGCGGGCGAATACATCGGCCTGCAGATGGGCCTGTCGTTCGCTTCCTTCTACGACCCCATGAGCCGCGGCAGCACCATGGTGGTGTCGCGCCTGCTGAACATGCTGGCGACGCTGATCTTTCTTGCGCTCGACGGCCACCTGCTGATCGTGAACGCGCTGGCCGAGAGCTTCCAGACGCTGCCCATCTCGGACGGCCCGCTGGTGGCGGGAGGATGGATGTTCCTGGTGCTGGCGGGCGGAGAGATCTTCGCCAGCGGGCTGCTGCTGTCGCTGCCGCTCATCACCGCGCTGCTCACCTTGAACCTGGCCATGGGCATCCTGAACCGCGCCTCGCCGCAGTTCAGCATCTTCGCGGTGGGCTTTCCGCTCACGCTGCTGGCGGGCATCTTCATGCTGCAGCTGCTGATGCCGAACCTGGGAGCCTTCCTGGAGCCGCGCTTCGCGCAGGGGATCGCGAACATGCTGCGGTTCACGCAGGGGCTTCGGCCTTAG
PROTEIN sequence
Length: 266
VTPSIFSVTSGQLEGWVVAFLWPFVRMLALVSTAPIFAESWVPRQVKVGIAAMLTLVISPLIGPFPAVPVVSAGGLWIIVQQVLIGVAMGFAMRMVFTAVLAAGEYIGLQMGLSFASFYDPMSRGSTMVVSRLLNMLATLIFLALDGHLLIVNALAESFQTLPISDGPLVAGGWMFLVLAGGEIFASGLLLSLPLITALLTLNLAMGILNRASPQFSIFAVGFPLTLLAGIFMLQLLMPNLGAFLEPRFAQGIANMLRFTQGLRP*