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cn_combo_scaffold_34_11

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(9795..10799)

Top 3 Functional Annotations

Value Algorithm Source
flagellar motor switch protein FliM n=1 Tax=Variovorax paradoxus RepID=UPI00037793F2 similarity UNIREF
DB: UNIREF100
  • Identity: 94.9
  • Coverage: 334.0
  • Bit_score: 631
  • Evalue 3.80e-178
fliM; flagellar motor switch protein FliM similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 334.0
  • Bit_score: 583
  • Evalue 4.30e-164
Flagellar motor switch protein FliM {ECO:0000313|EMBL:AGU51408.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovora similarity UNIPROT
DB: UniProtKB
  • Identity: 84.4
  • Coverage: 334.0
  • Bit_score: 583
  • Evalue 2.20e-163

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1005
ATGGCGTATGAACAGGTGCTTTCCCAGGACGAGGTCGATGCTCTCCTGCAAGGCGTCACCGGCGGAGACATCGACCAGTCGTCACCTCCGCCGCCCCCGCCCAAGGACGGCCTGCCGGCCTACGACCTCGGCGCGCCCGACCGCGTGGTGCGCAACCGCATGCACACGCTGGAGGTCATCAACGACCGCTTCGCGCGTGGCCTGCGCGGCGCGCTGCTGAACTTCATGCGCCGCAGCCCCGACATCTCGGTGGGGCAGGTCCAGATCCAGCAGTTCGGCGAGTTCGTGCGGCACCTTCCGGTGCCCGCGAACATCAACATGATCCACATGAAGCCGCTGCGCGGCACCGCCCTCTTCGTGTTCGACCCGAAGCTGGTGTTCCTCGTGGTGGACAACCTGTTCGGCAGCGACGGGCGCTACCACGTGCGCGTGGAAGGCCGCGACTTCACGCGCACCGAGCAGCGCATCATCAAGCGCCTGCTCGACATCTCGCTGCAGTGCTACGGCGAGGCATGGCAACCCGTGTTCCCGCTCGACTTCGACTACGTGCGCGCCGAGATGCACGGCAAGCTCGCCAACATCGTGGCGCCCAACGAGGTGGTGATCAACACCACGCTGCAGATCGAGTTCGGCCCCATCGGCGGCTTCCTGCACGTGTGCCTGCCCTACTCGATGATCGAGCCGATCCGCGACCTGCTGTCCAACCCGATCCAGGACGAGGTCGAGGTCGACAAGCGCTGGGTCACGCAGATGTCGCGCCAGATGCAGGCGGCCGACGTCGAGCTGGTGGCCGACTTCGTGACCATGCCCTCCACGCTGGGCGAAGTCATGAAGCTGCGGGTCGGCGACGTGATTCCCATCGAGCTGCCCGAGACCGTCGTCGCCAAGGTCGGCGGCGTGCCGGTGATGGAGTGCGGCTACGGCACCTCCAACGAGCGCTACGCACTGCGCGTGCAACAAATGATCTCCCACCAAGACAGCGATTTGAAGAACGACCATGACTGA
PROTEIN sequence
Length: 335
MAYEQVLSQDEVDALLQGVTGGDIDQSSPPPPPPKDGLPAYDLGAPDRVVRNRMHTLEVINDRFARGLRGALLNFMRRSPDISVGQVQIQQFGEFVRHLPVPANINMIHMKPLRGTALFVFDPKLVFLVVDNLFGSDGRYHVRVEGRDFTRTEQRIIKRLLDISLQCYGEAWQPVFPLDFDYVRAEMHGKLANIVAPNEVVINTTLQIEFGPIGGFLHVCLPYSMIEPIRDLLSNPIQDEVEVDKRWVTQMSRQMQAADVELVADFVTMPSTLGEVMKLRVGDVIPIELPETVVAKVGGVPVMECGYGTSNERYALRVQQMISHQDSDLKNDHD*