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cn_combo_scaffold_34_14

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(12941..13396)

Top 3 Functional Annotations

Value Algorithm Source
flagellar export protein FliJ n=1 Tax=Variovorax paradoxus RepID=UPI000377A1C1 similarity UNIREF
DB: UNIREF100
  • Identity: 92.1
  • Coverage: 151.0
  • Bit_score: 279
  • Evalue 1.60e-72
fliJ; flagellar export protein FliJ similarity KEGG
DB: KEGG
  • Identity: 72.7
  • Coverage: 150.0
  • Bit_score: 221
  • Evalue 1.50e-55
Flagellar export protein FliJ {ECO:0000313|EMBL:AGU51405.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax para similarity UNIPROT
DB: UniProtKB
  • Identity: 72.7
  • Coverage: 150.0
  • Bit_score: 221
  • Evalue 7.40e-55

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 456
ATGACACGCAAGCTCCCCCTCGGCATGCTGATCGACCTGGCGCACACGCAGACCGACGATGCTGCGCGGCGCCTGGGCGCACTGCAGAGCGCGCACCTCAACGCCAGCCAGAAGCTGGAACTGCTGCTGCAATACCGGCAGGACTATCACGACCAGCTCGATGCGCTGATGCGCGGCGGCCTGCCCTCTTCGCAGTGGCGCAACTACCGCAACTTCCTGGGCACGCTGGACGGCGCCATCGAGCAGCAGCGCGCCATCGCCGCGCAGACCGAGACCCGGCTCGACAACGGCCGCACCGACTGGCAACACCAGAAGCGCCGCCTGAGTTCGTTCGACACCCTGGCCGAGCGCGTGCGCATGCAGGAGCTGATGGCCGAAGCCAAGCGCGAGCAGCGCGACAGCGACGAGCGCGCGGCGCGCAAGTTCTTCGACCGCGCGTCGCACCCGACCCTTTGA
PROTEIN sequence
Length: 152
MTRKLPLGMLIDLAHTQTDDAARRLGALQSAHLNASQKLELLLQYRQDYHDQLDALMRGGLPSSQWRNYRNFLGTLDGAIEQQRAIAAQTETRLDNGRTDWQHQKRRLSSFDTLAERVRMQELMAEAKREQRDSDERAARKFFDRASHPTL*