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cn_combo_scaffold_34_18

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(16664..18400)

Top 3 Functional Annotations

Value Algorithm Source
flagellar M-ring protein FliF n=1 Tax=Variovorax paradoxus RepID=UPI000360ACFA similarity UNIREF
DB: UNIREF100
  • Identity: 88.3
  • Coverage: 583.0
  • Bit_score: 992
  • Evalue 1.90e-286
fliF; flagellar MS-ring protein similarity KEGG
DB: KEGG
  • Identity: 72.9
  • Coverage: 583.0
  • Bit_score: 787
  • Evalue 2.00e-225
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxu similarity UNIPROT
DB: UniProtKB
  • Identity: 72.9
  • Coverage: 583.0
  • Bit_score: 787
  • Evalue 1.00e-224

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1737
ATGAGCACGGCGGCACCCGCCGGCGAGTTGCCGGCGGCCGGAAACGGCCTGCCACCGATCCTGGAACGCCTTCGCGCGCAGCCCAAGCTGCCGCTGATCGTCGGCGGCGCGGCCCTGGTGGCCGCGGCCGCCGCGTTCGCGCTGTGGAGCCGCGGGCCCGACTACAAGGTGCTCTATACCAATGTGTCGGACCGCGACGGTGGCGCGATCATCGCGTCGCTGCAGCAGATGAACGTGCCCTACAAGTTCGCCGAAGGCGGCGGCGCGATTCTGATCGCCGGAGACAAGGTCGCGGAAACGCGCCTCAAGCTCGCGGCCCAGGGCTTGCCCAAGGCCGGCGGCGTCGGCTTCGAACTGATGGACAACCAGAAGTTCGGCACCAGCCAGTTCGCCGAGCAGGTCAATTACCAGCGCGGGCTGGAAGGCGAGCTGGCGCGCTCCATCGAATCGATCGGCAGCATCGAGTCGGCCCGGGTGCACCTGGCGCTGCCCAAGCCCTCGCTCTTCGTGCGCGACCAGAAGAAGCCCTCGGCCTCCGTGGTGCTGAACCTGATGCGCGGACGCAGCATCGACGAAGGTCAGGTCAGCGCCATCGTGCACATGGTCTCCAGCAGCGTGCCCGACCTCGACGCCAAGAGCGTTACGGTGGTCGACCAGCGCGGCAACCTGCTGTCTTCCGCGCGCGGCACCGACCGCGGGCTGGACGTGAGCCAGCTCAAGTATGCGCAGGAGATCGAGCAGAACTACATCCGCCGCATCGAGGCCATCCTGCAACCCATCGTGGGCGCGAACAACGTGCGCGCGCAGGTGGCGGCCGAGATCGATTTCTCGGTGGTGGAACACACCGACGAGAAGTACAAGCCCAACCAGGACCCGGCCCAGGCCGCCGTGCGCAGCCAGCAGTCGAGCGAGTCGGCGCAGCACAACGGCGCCCCGCCCGGCGGCGTGCCCGGCGCGCTGACCAACCAGCCGCCGGTGAACCCGACGGCGCCCATCGTCGGCCCGCGCGCGCCCAATGCCCCCGGCACCCCGCCACCCGGAACGCCTGGCGCGCCCGGCACCCCCGGCGCCCAGGGCGCGACCACCGCCTCCACCGCAGGCGCGGCCACCGGCCCGAGCAGCACCCGCAAGGACACCACCACCAACTACGAGCTCGACCGCACCATCCGCCACGTGCAGCAGGCTGCCGGCGGCGTGAAGCGGCTGTCGGTCGCGGTGGTCGTGAACAACCGCGACGCGACCGATGCCGCTGGCAAGGTCAACAGCCGCGCGCTCACGCCGGCCGAGCTGGAGCAGATCCGCAACCTCGCCAAGGAAGCCATGGGCTTCAGCCAGGACCGCGGCGACTCGCTCAACGTGGTCAACAGCGCCTTCGCCCGCGACGCCGACAGCGGCCCCGCACCCGAAGTGCCGTTCTGGCGCGACCGCGAGAACATCGAGATCGGCAAGACGGTGGGCCAGTACCTGTTCTATGCGCTGCTCGCACTGTTCGCCTGGCTGGCCGTGCTGCGGCCGCTGACGCGCCGCCATGCGCCCGCCGCGCCGACCCCGGTGCCGGTGGCCGAGCAGGAGCCGGCCGTCGAACCCGATGTCAACGCGCAGTCGGCCGAGGAAAGCCTGCGCGAACGCGAGGCCAACCGCAAGAAGGCCGACATGGACTATGCCCACCAGATCGGCGACAAGGATCCCAAACTGGTGGCCGCCCTGATCCAGCACTGGATGAACACCGATGAGTAG
PROTEIN sequence
Length: 579
MSTAAPAGELPAAGNGLPPILERLRAQPKLPLIVGGAALVAAAAAFALWSRGPDYKVLYTNVSDRDGGAIIASLQQMNVPYKFAEGGGAILIAGDKVAETRLKLAAQGLPKAGGVGFELMDNQKFGTSQFAEQVNYQRGLEGELARSIESIGSIESARVHLALPKPSLFVRDQKKPSASVVLNLMRGRSIDEGQVSAIVHMVSSSVPDLDAKSVTVVDQRGNLLSSARGTDRGLDVSQLKYAQEIEQNYIRRIEAILQPIVGANNVRAQVAAEIDFSVVEHTDEKYKPNQDPAQAAVRSQQSSESAQHNGAPPGGVPGALTNQPPVNPTAPIVGPRAPNAPGTPPPGTPGAPGTPGAQGATTASTAGAATGPSSTRKDTTTNYELDRTIRHVQQAAGGVKRLSVAVVVNNRDATDAAGKVNSRALTPAELEQIRNLAKEAMGFSQDRGDSLNVVNSAFARDADSGPAPEVPFWRDRENIEIGKTVGQYLFYALLALFAWLAVLRPLTRRHAPAAPTPVPVAEQEPAVEPDVNAQSAEESLREREANRKKADMDYAHQIGDKDPKLVAALIQHWMNTDE*