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cn_combo_scaffold_34_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 22929..23348

Top 3 Functional Annotations

Value Algorithm Source
flagellar biosynthesis protein FliS n=1 Tax=Variovorax paradoxus RepID=UPI0003810BA0 similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 139.0
  • Bit_score: 252
  • Evalue 3.40e-64
fliS; flagellar protein FliS similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 139.0
  • Bit_score: 206
  • Evalue 6.00e-51
Flagellar protein FliS {ECO:0000313|EMBL:AGU51396.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B similarity UNIPROT
DB: UniProtKB
  • Identity: 75.5
  • Coverage: 139.0
  • Bit_score: 206
  • Evalue 3.00e-50

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 420
ATGTACACGTCCCACAACATGCGCACCGGCGCCGGCGCCTATGCGCGCGTCGGCGTGGAAACGAGCGTGATGAGCGCGTCGCCGCACCAGCTCATCGTCATGCTTTTCGATGGCGCCAAGACCGCCATCGGCATGGCCAGGCATCACATGGCGGCCGGCGAGATCGAAGCCAAGGGCAAAGCGATCTCGAAGGCCATCGGCATCGTGGACAACGGCCTGAAGGCCGGACTCGATGCACAGGCAGCCGGCGAGGCCGGTGCCGAACTCGTGAGCAACCTGTCGGCGCTTTACGACTATGTCGTGCAGCGTCTGTTCCGGGCCAACCTGCACAACGACGTGCAGGCCCTGGACGAGGCCGACCGGCTGCTGGAGAACGTCGCTTCCGCCTGGCGGGAAATCGATGACCGGGTTCGCGGCTGA
PROTEIN sequence
Length: 140
MYTSHNMRTGAGAYARVGVETSVMSASPHQLIVMLFDGAKTAIGMARHHMAAGEIEAKGKAISKAIGIVDNGLKAGLDAQAAGEAGAELVSNLSALYDYVVQRLFRANLHNDVQALDEADRLLENVASAWREIDDRVRG*