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cn_combo_scaffold_34_24

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 23362..23721

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000378DB35 similarity UNIREF
DB: UNIREF100
  • Identity: 64.5
  • Coverage: 110.0
  • Bit_score: 147
  • Evalue 7.70e-33
fliT; putative flagellar protein FliT similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 110.0
  • Bit_score: 119
  • Evalue 6.30e-25
Putative flagellar protein FliT {ECO:0000313|EMBL:AGU51395.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax pa similarity UNIPROT
DB: UniProtKB
  • Identity: 50.9
  • Coverage: 110.0
  • Bit_score: 119
  • Evalue 3.10e-24

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 360
ATGAAGACAGGGAAAGACAGGGAAAAGATGGTAATCCGGAGTGAGATCGTTCATTGCTACGAGGAGCTTGCCTCCAGCGTCTCTTTGATGCTGGAGCTCGCACGCGACAAGGATTGGGGTCGCCTGCCCGACCTCGAGGCCCGCTGCTCGGCCATCGTCGACCGGCTCAAGATCATCGAGCCCACCGCGACGCTGGACGTGGTGGAGGTCGAGCGCGTGCTGCATCTGCTCGACCGCATCCGCGTGGAACAGACCGAGGTGTCGAACCTGATCAAGCCGCAGCTCGACGAGCTCATCGGCCGCATGGGTTATCTCAACCAGCAGAAGAATCTGGGCAAGGCCTACGGGCTGACGCACTGA
PROTEIN sequence
Length: 120
MKTGKDREKMVIRSEIVHCYEELASSVSLMLELARDKDWGRLPDLEARCSAIVDRLKIIEPTATLDVVEVERVLHLLDRIRVEQTEVSNLIKPQLDELIGRMGYLNQQKNLGKAYGLTH*