ggKbase home page

cn_combo_scaffold_34_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 25658..26062

Top 3 Functional Annotations

Value Algorithm Source
flagellar transcriptional regulator FlhD n=1 Tax=Variovorax paradoxus RepID=UPI00036A6CD1 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 122.0
  • Bit_score: 206
  • Evalue 1.60e-50
flagellar transcriptional activator similarity KEGG
DB: KEGG
  • Identity: 71.3
  • Coverage: 115.0
  • Bit_score: 153
  • Evalue 5.80e-35
Flagellar transcriptional regulator FlhD {ECO:0000256|HAMAP-Rule:MF_00725, ECO:0000256|SAAS:SAAS00011626}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 71.3
  • Coverage: 115.0
  • Bit_score: 153
  • Evalue 2.90e-34

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 405
GTGGACGTGAAATCGGAAATGGAAATAGACGTGGAAAATTGCAATCTCAGTGCAAACGGTGTGATTTCGAAAGAAATCGGCGAGATTAATCTGGCCTATATGCTGCTTGCCCAGAAGCTGGTCAAACAAGACCGGGCAGAGGCCATGTTTCGCCTCGGAGTGGGGCGCGAGCTTGCTGATTTGCTGGCGAACATGTCGCTCAGCCAGATCGTCAAGCTGGCGGCATCCAACTTCCTGTTGTGCAGCTTCCGGCTCGACGACCGCCCGATGTTCGCGGTGGTCGGCGAGGGCAAGGAGCCCGCGCTGCAGCAGGCGCACATGTCGATCCTGATGGCCGCGCGACAGGCGCAGTCGCAAGGGGCTTCGCCATCGCAGATGCGCGAGCCTGGAGCGGCTGCCGCATGA
PROTEIN sequence
Length: 135
VDVKSEMEIDVENCNLSANGVISKEIGEINLAYMLLAQKLVKQDRAEAMFRLGVGRELADLLANMSLSQIVKLAASNFLLCSFRLDDRPMFAVVGEGKEPALQQAHMSILMAARQAQSQGASPSQMREPGAAAA*