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cn_combo_scaffold_34_28

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 26059..26646

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Variovorax paradoxus RepID=UPI00037DDA98 similarity UNIREF
DB: UNIREF100
  • Identity: 91.8
  • Coverage: 195.0
  • Bit_score: 370
  • Evalue 1.20e-99
transcriptional activator FlhC similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 185.0
  • Bit_score: 287
  • Evalue 3.70e-75
Flagellar transcriptional regulator FlhC {ECO:0000255|HAMAP-Rule:MF_01891}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="V similarity UNIPROT
DB: UniProtKB
  • Identity: 74.6
  • Coverage: 185.0
  • Bit_score: 287
  • Evalue 1.90e-74

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
ATGACCCGCAAAAGCGTCCTGGGCGAAGTCAGAGAGGTGCAGCTCGCGGTCGAGCTGATCGGGCTCGGTGCCCGCTTGCAGTTCCTGGAGGCTGCCGTCGCATTGAGCCGGGAACGCTTGATCCGCCTGTACAAGGAACTCAAGGGTGTCTCGCCGCCCAAGGGCCTGCTGCCGTTCTCTACCGACTGGTACATGACGTGGCTGGCCAACATTCACTCGTCGATGTTCTACAACATCTACCGTTTCATGCTCGACGAGGCGGACGAGAGCGAGCTGCCCGCGCTCATCAAGGCCTATCGGCTCTACACCGAGCAAGTCGGCTCGCAAGGCGGCGAGGTGGTGCTCGACTTCACCCGCGCCGAGACGATGGTGCGCTTCTTCGACAGCGACATGCTGCAGCTGAGCACCTGCTGCCGCTGCGGCGGCCACTTCGTGGCGCATGCGCACGACAACAAGAATGGTTATGTGTGTGTTCTGTGCCGTCCGCCTTCGCGCGCGGGCAAGGCACGCAAGCCCAAGGTCGCCGAGGTGCGGCGGGGCGGATTGATCTCCGTGGGACCGGTGCTGGACATCGGGGGCGCGGTCTAG
PROTEIN sequence
Length: 196
MTRKSVLGEVREVQLAVELIGLGARLQFLEAAVALSRERLIRLYKELKGVSPPKGLLPFSTDWYMTWLANIHSSMFYNIYRFMLDEADESELPALIKAYRLYTEQVGSQGGEVVLDFTRAETMVRFFDSDMLQLSTCCRCGGHFVAHAHDNKNGYVCVLCRPPSRAGKARKPKVAEVRRGGLISVGPVLDIGGAV*