ggKbase home page

cn_combo_scaffold_50_20

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 19120..21369

Top 3 Functional Annotations

Value Algorithm Source
penicillin-binding protein 1c (EC:2.4.1.129) similarity KEGG
DB: KEGG
  • Identity: 90.0
  • Coverage: 741.0
  • Bit_score: 1307
  • Evalue 0.0
Penicillin-binding protein 1C n=1 Tax=Variovorax sp. CF313 RepID=J2KYQ1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 759.0
  • Bit_score: 1317
  • Evalue 0.0
Penicillin-binding protein 1C {ECO:0000313|EMBL:EJL78118.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 89.7
  • Coverage: 759.0
  • Bit_score: 1317
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2250
ATGCAGTTCGCGCCTCCCTCCTTCGACCGCAAGGCCCTGGCCTTCGCCCTGCTCGCGGCGGTTTGCGCGCAACCGGCGCTGGCCCTCGTGAGCTTCGAGGAAGTGAAGCGTGACTTCCGCTCGTCGGACACCGCCGTGCTCGACCGCAACGGCGAACTGCTGCAGCGCGTGCGCACCGACCCCACCGTGCGGCGCGGCCAGTGGACGCCGCTGGCCGACGTGTCGCCGGCCCTGCGCACGGCGATGGTGCTGAGCGAGGACAAGCGCTTCTACGAACACAGCGGCATCGACTGGCGCGCCGTGTCCGCAGCGGCCTGGGGCAACCTTTGGAACACGCGCACGCGCGGCGCCTCGACCATCACGATGCAGCTCTCCGGCCTGCTCGACGACGATCTGCGACGCGCCTCGGGTGGCCGCAGCTTCACGCAGAAGATCGGCCAGACGGTGGCCGCCGCGCAGTTGGAGCGCAACTGGCGCAAGGACCAGATCCTGGAGGCCTACCTGAACACCGTGCCGTTCCGCGGCGAGATCGTGGGCATCGACGCGCTCTCGCGCACGCTCTTCGGCAAGGCGCCGAGCGGGCTCGACGCGCGCGAAGCCGCCGTGGCCTCGGCGCTGGTGCGCGCGCCCAATGCCAAGCCCGCGCTGGTGGCGCAGCGCGCCTGCGAGGTGCTGCGCACCATGGAGCCGCAGCAGAAGGTCGACTGCGAGGCGCTGGACATGTTCACCAGCGCCGCGGTGCAGCGCCGGGCCTTCGAGCCGAACGAGGGCATCGCGCCCCACGCGGCGAGGCGGGTGCTGCGCGAGATGCGGGATGCGAACGCGGCGGCGGACCCGGCGAAGAAAGGCAAGGACAAGGAAGCCAGCGTGCGAACCACACTGCGCGCGCCGCTGCAGCGCTTTGCGCTCGACACGCTGCAGCGCCACCTGCGCGAACTGCGCGACCGCCATGTGGAGGACGGCGCGCTCGTCGTGCTCGACAACGCCACCGGCGAAGTGCTGGCATGGGTCGGCTCCTCGGGCCCGCTGAGCCAGGCGGCCGAGGTCGACGGCGTGACCGCGCTGCGCCAGCCCGGCTCCACGCTCAAGCCGCTGCTCTACGGGCAGGCCATTGCCGAGCGGCGCATCACCGCCGCCTCGCTGATCGAGGACTCGTCGGCGCAGATCAGCACCGCCAGCGGCCTCTACATTCCGCAGAACTACGACCGCCGCTTCAAGGGCCCGGTGTCGGCGCGCACCGCGCTGGCCGCCTCGCTCAACGTGCCGGCCGTGCGAACGCTGGTGATGGTGTCGCCCGAAGCCTTCGCGCGCGAGCTGCGCGCCGCCGGCCTGCCGCTGCGCGAAAGCGGCGACTACTACGGCTACAGCCTTGCGCTCGGCAGCGCCGAGGTGTCGCTGCTGTCGCTCACCAACGCCTACCGCATGCTGGCCAACGGCGGACGCTACGGCACGACGACGCTGACCGCGCGGCCGACGCCCACGGCCCCCACGGCCGCCGACAAGGCCAGGGCCGCCGAGCCGCCCCTGCTCGACCCGCGCGCCGCCTTCATCGTCGGCGACATCCTCTCCGACCCGAACGCGCGCACCCGCACCTTCGGCCTGGACAGCATCCTCTCCACCCGCTTCTGGACCGCCGTGAAGACCGGCACCAGCAAGGACATGCGCGACAACTGGGCCGTGGGCTGGTCGCAGCGCTACACGGTCGGCGTGTGGGTGGGCAACGCCAGCGGCGCTTCGATGTGGGACGTGAGCGGCACCAGCGGCGCGGCGCCGGTGTGGGCCGAGGTGATGCGCTTCCTGCACGCGCGCGAGCCCAGCCGCGCGCCGGCGCCGCCTGCCGGCGTGGTGCAGGCGCATGTGGAATTCGGCCCCGGCGCCGACGGCGGCCCGCTGGAGGCTGCGCGCGACGAATGGTTTTTGCAAGGCACCGAGCAGCCCCTGTTCGCACTCGACACCGGCATGGCCGGCAGCGCCGCGTCGGCGCGCATCACCGCGCCGGCCGACGGCACCATCATCGCGGTCGACCCCGACATTCCGCCGCTGCGCCAGCGCGTGCGCTTCGAATCCGAAGGGCGCGGCGTGCAGTGGCGCATCGACGGCAAGCATTTCGCGCGCGGCAACAGCGCGCAGTGGCTGCCCTGGCCGGGGCGTCACGTGATCGAACTGGTCGACGGCTCGGGCAAGGTGGTCGATCAGCGCCGCATCGAAGTGCGCGGCGCGGGCGTCGTGACCAAGAGCGCGAAGCGATGA
PROTEIN sequence
Length: 750
MQFAPPSFDRKALAFALLAAVCAQPALALVSFEEVKRDFRSSDTAVLDRNGELLQRVRTDPTVRRGQWTPLADVSPALRTAMVLSEDKRFYEHSGIDWRAVSAAAWGNLWNTRTRGASTITMQLSGLLDDDLRRASGGRSFTQKIGQTVAAAQLERNWRKDQILEAYLNTVPFRGEIVGIDALSRTLFGKAPSGLDAREAAVASALVRAPNAKPALVAQRACEVLRTMEPQQKVDCEALDMFTSAAVQRRAFEPNEGIAPHAARRVLREMRDANAAADPAKKGKDKEASVRTTLRAPLQRFALDTLQRHLRELRDRHVEDGALVVLDNATGEVLAWVGSSGPLSQAAEVDGVTALRQPGSTLKPLLYGQAIAERRITAASLIEDSSAQISTASGLYIPQNYDRRFKGPVSARTALAASLNVPAVRTLVMVSPEAFARELRAAGLPLRESGDYYGYSLALGSAEVSLLSLTNAYRMLANGGRYGTTTLTARPTPTAPTAADKARAAEPPLLDPRAAFIVGDILSDPNARTRTFGLDSILSTRFWTAVKTGTSKDMRDNWAVGWSQRYTVGVWVGNASGASMWDVSGTSGAAPVWAEVMRFLHAREPSRAPAPPAGVVQAHVEFGPGADGGPLEAARDEWFLQGTEQPLFALDTGMAGSAASARITAPADGTIIAVDPDIPPLRQRVRFESEGRGVQWRIDGKHFARGNSAQWLPWPGRHVIELVDGSGKVVDQRRIEVRGAGVVTKSAKR*