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cn_combo_scaffold_50_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 24086..24766

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator n=1 Tax=Variovorax sp. CF313 RepID=J2THY0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 91.2
  • Coverage: 226.0
  • Bit_score: 394
  • Evalue 8.90e-107
Transcriptional regulator {ECO:0000313|EMBL:EJL78117.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF31 similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 226.0
  • Bit_score: 394
  • Evalue 1.30e-106
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 85.4
  • Coverage: 226.0
  • Bit_score: 375
  • Evalue 1.20e-101

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 681
ATGCTTGCTCAAGCCCCTCGCACCTCCCTGGCGGACGCCGCCGCCGAAAGCATCCGCGCCGAAATCTCCGGCGGCCGCTGGGCTGTCGGCAGCCGAATTCCCATCGAGCCTCAACTCGCCCTGCTGCTGGGCGTGAGCCGCGGCACGGTGCGCGAGGCGGTCAAGACGCTGGTGTCGCGCGGCCTGCTCGAAGTGCGCCAGGGTTCAGGCACCTATGTGCGTTCCGGCTTCGACCCCTCTTCCAGCCTGCAGAAAATGCGCCGCGCCAGCCTGCGCGACCAGTTCGAAGTGCGCCGCGCGCTCGAGGTCGAGGCGGCCCGGCTCGCCGCGGTGCGCCACACGGCCAAGGACCTGCGCCGGCTGAACACGCTGCTCGACAAGCGCGGCGTGCCCGACGAGAGCGACGACGGCGCCAGCTTCATCGAACGCGACCTGGCTTTTCACCTAGCCATCGTCGACGTATCGGGCAACCTCGCGCTGGCCGAGACCTGCCGCTTCATCACCGGCTACATCAAGGAAACGATCGTCAGCACCCTGGGCACCGTGCTGCCCGAGCCCGACGAGGCCGCGCACCGCTCCATCATCGAAGGCATCGCGAGCCGCGACCCCGATGTCGCCGCCGCGGCGGTGCGCGCCTTCATGGCGCCGATGATCAACGCGCTGGCGCTGGGCACGGCATGA
PROTEIN sequence
Length: 227
MLAQAPRTSLADAAAESIRAEISGGRWAVGSRIPIEPQLALLLGVSRGTVREAVKTLVSRGLLEVRQGSGTYVRSGFDPSSSLQKMRRASLRDQFEVRRALEVEAARLAAVRHTAKDLRRLNTLLDKRGVPDESDDGASFIERDLAFHLAIVDVSGNLALAETCRFITGYIKETIVSTLGTVLPEPDEAAHRSIIEGIASRDPDVAAAAVRAFMAPMINALALGTA*