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cn_combo_scaffold_50_24

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 24763..26079

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037AAAD6 similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 436.0
  • Bit_score: 758
  • Evalue 2.70e-216
Cyanate permease {ECO:0000313|EMBL:EJL78116.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.6
  • Coverage: 421.0
  • Bit_score: 756
  • Evalue 2.40e-215
putative transporter, MFS-type similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 415.0
  • Bit_score: 742
  • Evalue 7.30e-212

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGAGCGCCGCAGCCATCACGCGCGACGCCACCGTTCAACGTACGCAGCCCGCGCAACCCGGCGCCACCGAAGACCTGTTGATCGACACCGAGGCCGACAACAGGCCCGCGCCGCTCCCCACGCCCACCCCCAACCTGGGCCGGCGCATCCTGCTCGGCGCGAGCGTGGTGCTGATCGCGTTCAACCTGCGGCCGGTGTTCGCCAGCCTCTCGGTGGTGCTACCGGAAATCATCAAGGCCACGGGCCTGTCGGCCACCGCCGCGAGCCTGCTGACCACGCTGCCGATCGTCTGCCTCGGCGTGTTCGCGCCGCTGGCGCCCGGGCTCGGACGCCGCTTCGGCACCGAGCGCACGCTGCTCGGCTGCATGGTGCTGATCCTGCTGGGCACGATGCTGCGCGGCACCGGCAACATCCCGCTGCTGTTCCTGGCGTCGGCCATCGCGGGCAGCGGCATCGCGGTGTCGAACGTGCTGCTGTCGGGGCTGGTCAAGCGCGACTTCGCGAAGCAGGCGGCGCTGATGATGGGCCTCTACACCATGGCGGTGTGCGGCGGTGCCGCCAGCGCGGCGGGCCTTACGGTGCCCATCGAGCATGCGCTGGGCGGCGGCTGGACCATGGCACTGGCCATGTGGGCGCTGCCCGCAGCGGTGGTCACGCTGGTCTGGGCGCCGCAGGCGCTGCCGGTCAGGCCGGTGGCGAGCGAATCGGGCTTCACGGTGCGCGGGCTGTGGCGCGACCGGCTGGCCTGGCAGGTCACCTTCTTCATGGGGCTGCAGTCCGCCCTGGCCTACATCGTGATGGGCTGGCTCGCGCCGATCCTGCGCGAGCGCGGACTCGGCAGCGAGACGGCGGGCTACGTGGTGTCGCTGTCGGTCATGACGCAGGTGGTGACCTGCCTCGTGGTGCCGGCGCTGGCGGTGAAGCTGCGCAACCAGCGCGGGCTGGCCGTGGCGCTGGCGATGCTCACCGTCGCGGCCATGCTGGCGATGCTGTTCGCGCCGCTGGGCGGCGTGTGGCTGTGGGCGGTTCTGCTGGGCATTGCGCAGGGGGGCACCTTCGCGCTGGCGCTCACCATGATCGTGCTGCGTTCGCCCGATTCGCACGTGGCCGCGCACCTGTCGGGCATGGCGCAAGGCGTGGGCTACATGGTGGCGGCCTTCGGCCCGCTGGTGGCCGGGCTGCTGCACGGATGGACGGGGAGCTTTCGCGCTTCGTCGTGGCTGTTCATCGGCCTGGGCATCGCGCTGGTGATCGCGGGCCTCGGCGCGGGGCGCACCAAGCACGTGGGCGCGGTGACTGTGCCGCGCGGCGCCTGA
PROTEIN sequence
Length: 439
MSAAAITRDATVQRTQPAQPGATEDLLIDTEADNRPAPLPTPTPNLGRRILLGASVVLIAFNLRPVFASLSVVLPEIIKATGLSATAASLLTTLPIVCLGVFAPLAPGLGRRFGTERTLLGCMVLILLGTMLRGTGNIPLLFLASAIAGSGIAVSNVLLSGLVKRDFAKQAALMMGLYTMAVCGGAASAAGLTVPIEHALGGGWTMALAMWALPAAVVTLVWAPQALPVRPVASESGFTVRGLWRDRLAWQVTFFMGLQSALAYIVMGWLAPILRERGLGSETAGYVVSLSVMTQVVTCLVVPALAVKLRNQRGLAVALAMLTVAAMLAMLFAPLGGVWLWAVLLGIAQGGTFALALTMIVLRSPDSHVAAHLSGMAQGVGYMVAAFGPLVAGLLHGWTGSFRASSWLFIGLGIALVIAGLGAGRTKHVGAVTVPRGA*