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cn_combo_scaffold_50_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 27696..29933

Top 3 Functional Annotations

Value Algorithm Source
isocitrate dehydrogenase, NADP-dependent (EC:1.1.1.42) similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 745.0
  • Bit_score: 1434
  • Evalue 0.0
Isocitrate dehydrogenase, NADP-dependent, monomeric type n=1 Tax=Variovorax sp. CF313 RepID=J3CTW5_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 745.0
  • Bit_score: 1435
  • Evalue 0.0
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:EJL78111.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 745.0
  • Bit_score: 1435
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2238
ATGAGCACGAAGCAACCCACCATCGTCTACACCCTCACCGACGAGGCGCCCCTGCTGGCGACCTACGCGTTTCTGCCCATCGTGCGCGCGTTCACGACACCGGCCGGCATCAACCTCGAAACCAGCGACATCTCGGTGGCAGCCCGCATCCTGGGCGAATTCCCCGAATTCCTGAGCGACGACCAGAAGGTGCCCGACAACCTGGCCGAACTGGGCAAGCTCACGCTCAAGCCCGAAGCCAACATCATCAAGCTGCCCAACATCAGCGCTTCGGTCTCCCAGCTCAAGTCGGCGATCAAGGAACTGCAAGGCAAGGGCTACAAGATCCCCGACTACCCGGAAAACCCGACCTCGGATGAGGACAAGGACATCCGCGCCCGCTACAACAAGTGCACCGGCAGCGCGGTGAACCCCGTGCTGCGCGAAGGCAACTCCGACCGCCGCGCGCCCAAGGCCGTGAAGGAATACGCCCGCAAGAACCCGCACAGCATGGCCGACTGGAGCCAGGCCTCGCGCTCGCACGTCTCGCACATGCACGGCGGCGACTTCTATCACGGCGAAAAGTCCATGACGCTGGACCGCGCGCGCAACGTCAAGATGGAGCTGATCACCAAGAGCGGCAAGACCATCGTGCTCAAGCCCAAGGTCGCGCTGCTGGACCGCGAAGTCATCGACTCCATGTTCATGAGCAAGAAGGCCCTCCTGGCCTTCTATGAAAAGGAAATCGAAGACGCGCACAAGACCGGCGTGATGTTCTCGCTGCACGTCAAGGCCACCATGATGAAGGTCTCGCACCCCATCGTGTTCGGCCACTGCGTGAAGATCTTCTACAAGGAAGCCTTCGAGAAACACGGCAAGCTGTTCGACGAGCTGGGCATCAACGTCAACAACGGCATGGTCGACCTGTACACCAAGATCGCCGCGCTGCCGCAGAGCACGCAGGACGAGATCAAGCGCGACCTGCACGCCTGCCACGAGAACCGCCCCGAGCTGGCGATGGTCGACTCGGCCAAGGGCATCACCAACTTCCACTCGCCCAACGACGTGATCGTCGACGCCTCGATGCCCGCGATGATCCGCAACGGCGGCAAGATGTGGGGCGCCGATGGCCGCCTGAAGGACGTCAAGGCCGTGATGCCCGAATCGACCTTCGCCCGCATCTACCAGGAGATCATCAACTTCTGCAAGTGGCACGGCGCCTTCGACCCCAAGACCATGGGCACGGTGCCCAACGTGGGCCTGATGGCACAGAAGGCCGAGGAATACGGTTCGCACGACAAGACCTTCGAGATCCCCGAAGACGGCGTCGCCAACATCACCGACCTGGACACCGGTGAAGTGCTGATGAGCGAAGACGTGGAGCAAGGCGACATCTGGCGCATGTGCCAGGTCAAGGACGCCGCGATCCGCGACTGGGTCAAGCTGGCCGTCACCCGCGCGCGCAATTCGGGCATGCCCGTGGTGTTCTGGCTGGACGCCTACCGCCCGCACGAGGCGCAACTGATCACCAAGGTCAAGATGTACCTGCACGAGCACAACACCTCGGGCCTGGACATCCAGATCATGAGCCAGGTGCGCGCCATGCGTTACACGCTGGAGCGCGTGGTCCGCGGCCTGGACACCATCAGCGCCACCGGCAACATCCTGCGCGACTACCTGACCGACCTGTTCCCCATCATGGAACTGGGCACCTCGGCCAAGATGCTGTCGATCGTGCCGCTGATGGCCGGCGGCGGCCTGTACGAGACCGGCGCGGGCGGCTCGGCCCCCAAGCACGTGCAGCAACTGGTGGAAGAAAACCACCTGCGCTGGGACTCGCTGGGCGAATTCCTCGCGCTGGCCGTGAGCCTGGAAGACCTGGGCCTGAAGACCGGCAACAAGAAAGCCGCCATCCTGGCCAAGACGCTCGACACCGCCACCGGCAAGCTGCTGGACAACAACAAGAACCCGTCGCCCAAGACCGGCCAGCTCGACAACCGCGGCAGCCAGTTCTACCTGGCCATGTACTGGGCCCAGGAACTCGCGGCGCAGACCGACGACAAGGAACTGCAGGCATTGTTCGTGAAGCTGGCCGACTCGCTCACCAGCAACGAGAAGAAGATCGTCGACGAGCTGGCCGCCGTGCAGGGCAAGGCCGTGGACATCGGCGGCTACTACCTGGCCGACAAGGCGAAGTTCGAAACGGTGATGCGCCCGAGCGCCACGCTGAACGCGGCGCTGGCTTCCGCGCAAGGCTGA
PROTEIN sequence
Length: 746
MSTKQPTIVYTLTDEAPLLATYAFLPIVRAFTTPAGINLETSDISVAARILGEFPEFLSDDQKVPDNLAELGKLTLKPEANIIKLPNISASVSQLKSAIKELQGKGYKIPDYPENPTSDEDKDIRARYNKCTGSAVNPVLREGNSDRRAPKAVKEYARKNPHSMADWSQASRSHVSHMHGGDFYHGEKSMTLDRARNVKMELITKSGKTIVLKPKVALLDREVIDSMFMSKKALLAFYEKEIEDAHKTGVMFSLHVKATMMKVSHPIVFGHCVKIFYKEAFEKHGKLFDELGINVNNGMVDLYTKIAALPQSTQDEIKRDLHACHENRPELAMVDSAKGITNFHSPNDVIVDASMPAMIRNGGKMWGADGRLKDVKAVMPESTFARIYQEIINFCKWHGAFDPKTMGTVPNVGLMAQKAEEYGSHDKTFEIPEDGVANITDLDTGEVLMSEDVEQGDIWRMCQVKDAAIRDWVKLAVTRARNSGMPVVFWLDAYRPHEAQLITKVKMYLHEHNTSGLDIQIMSQVRAMRYTLERVVRGLDTISATGNILRDYLTDLFPIMELGTSAKMLSIVPLMAGGGLYETGAGGSAPKHVQQLVEENHLRWDSLGEFLALAVSLEDLGLKTGNKKAAILAKTLDTATGKLLDNNKNPSPKTGQLDNRGSQFYLAMYWAQELAAQTDDKELQALFVKLADSLTSNEKKIVDELAAVQGKAVDIGGYYLADKAKFETVMRPSATLNAALASAQG*