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cn_combo_scaffold_528_24

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21045..22193

Top 3 Functional Annotations

Value Algorithm Source
pyridoxal-5''''-phosphate-dependent protein subunit beta n=1 Tax=Variovorax paradoxus RepID=UPI0003679805 similarity UNIREF
DB: UNIREF100
  • Identity: 93.7
  • Coverage: 378.0
  • Bit_score: 709
  • Evalue 2.10e-201
Threonine synthase {ECO:0000313|EMBL:EJL75219.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.6
  • Coverage: 382.0
  • Bit_score: 707
  • Evalue 1.10e-200
pyridoxaL-5'-phosphate-dependent protein beta subunit similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 382.0
  • Bit_score: 695
  • Evalue 6.80e-198

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
ATGACCTCGAAAGAACGCGCGCGCTACGTCGATCCGCGCACCGGCAAGCATCACGAACTGTCGGAGCGCCGCTGGCGCTCCGACGACGGCAATCCGATGCTGGTCACGCCGTTGCCCGGCATCTCGCGCGACGACATCGATTCGCGTGAGCGTTCGCTCTGGCGTTATCGCGCGGCGCTGCCGGTGGTCATCGAGAGGCCGGCGAGCATGGGCGAGGGCTGTACGCCGCTGGTGCAAAAGCGCTGGGGCGGGCTGGAGCCGTATTTCAAGCTCGAATGGTTCAACCCGACCTGCAGCTTCAAGGACCGGGGCGCGGCCGTGATGATGTCCTTCCTGCGCCAGATCGGCGTCGACGCGGTGCTGGAGGACAGCTCGGGCAATGGCGGCGCGGCCATTGCGGCCGCCGGTGCGGCGGCGGGCATGCGCGTGAAGGTGCTGGCGCCCAGCTACACGCCGGCGCCCAAGGTGGCGCAGATCCGCGCCTTCGGGGCCGAAGTGCAACTGGTGCCGGGGCCGCGCGAGGAATCGGAGTACGAGGCGGTGCGCCAGTCGGAATCGATCTTCTACGCGAGCCACAACTGGCACCCCTTCTTCCTGGAGGGCACGAAGACGCTGGCCTACGAGCTGTGGGAAGACCTGGGCTTTGTTGCGCCCGACAACGTGGTGATTCCGACCGGAGCGGGCAGCAACGTGCTGGGCTGCTGGATCGGCTTCAAGGAGCTGCTGGCGGCGGGGCAGATCAGCAAGCTGCCGCGCATCTTCGTCGCGCAGCCGCTGAACTGCTCGCCGATCGACGCGAGCTTCGTGGCGGGCGTGGACACGCTGGTGGAGCGCGCCGTGCAGCCGACCATCGCGGAAGGCACAGCGATCAAGCGGCCCGTGCGCCTGCGGGAAATTTTGCAGGCGCTGCGCGAGACCGGCGGCAAAACGGTGGCGCTGACCGAGGAGCAGATCGCCGCTGCGGTGCGCCAGTTGGCCGCGAGCGGGCTCTACGCCGAGCCGACATCCGCCTCGGCCGCGGCGGCCATCGACGTGCTGGCGCAGCGCGGCGACATCCGCGCTGGCGAGACGACGGTTGCATTGCTGACCGGCACGGGCCTGAAGTCGACGCAGTTCATGACCGGGCTGTTCGGCGGCGAGACCGCATAG
PROTEIN sequence
Length: 383
MTSKERARYVDPRTGKHHELSERRWRSDDGNPMLVTPLPGISRDDIDSRERSLWRYRAALPVVIERPASMGEGCTPLVQKRWGGLEPYFKLEWFNPTCSFKDRGAAVMMSFLRQIGVDAVLEDSSGNGGAAIAAAGAAAGMRVKVLAPSYTPAPKVAQIRAFGAEVQLVPGPREESEYEAVRQSESIFYASHNWHPFFLEGTKTLAYELWEDLGFVAPDNVVIPTGAGSNVLGCWIGFKELLAAGQISKLPRIFVAQPLNCSPIDASFVAGVDTLVERAVQPTIAEGTAIKRPVRLREILQALRETGGKTVALTEEQIAAAVRQLAASGLYAEPTSASAAAAIDVLAQRGDIRAGETTVALLTGTGLKSTQFMTGLFGGETA*