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cn_combo_scaffold_658_8

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(6540..7226)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00035D6CF0 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 228.0
  • Bit_score: 401
  • Evalue 4.30e-109
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 88.1
  • Coverage: 227.0
  • Bit_score: 400
  • Evalue 2.70e-109
ABC transporter related protein {ECO:0000313|EMBL:ADU38446.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax par similarity UNIPROT
DB: UniProtKB
  • Identity: 88.1
  • Coverage: 227.0
  • Bit_score: 400
  • Evalue 1.40e-108

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGAGTTCTTCGCTGCACCTCGAATCGGTACGGCTCGCCTACGACACGCCGCGCGGACCGCACACCGTGGTCGACGACTTTTCGCTCGCGCTGGCCGCGGGCGACATCGCCTGCCTGTTCGGCCCCTCGGGCTGCGGCAAGACCACGGTGCTGCGCGCCATCGCCGGCTTCGAGCCGGTGCGTGCCGGCAGCATCCGCCTGGGCGATGCATTGCTGTCGTCCAGCCAGATCCACCTGCCGCCCGAGCAGCGGCGCGTAGGCATGATGTTCCAGGAATACGCGCTGTTCCCGCACCTGTCGGCCGCCAGGAACGTGGCCTTCGGGCTGCGCCGCCTGCCTCGCGCCGCGCAGCGCGAGCGCGTGGCCGAGATGCTCGCGCTGGTCGGCCTGGCCGATGCCGCGGAGCGCTATCCGCACGAGCTTTCGGGCGGGCAGCAGCAACGCATCGCGCTGGCCCGCGCGCTCGCGCCCTCGCCCGCGCTGCTGCTGCTCGACGAGCCTTTCTCCAACCTCGACGGCGGCACGCGCGAGCGCCTGACGGCGCAGGTGCGAGACATCCTCAAGCAGGCGGGCCAGACCGCGATCCTGGTGACGCACAACGAGGCCGAGGCACAGGCCATGGCCGACCGCATCGGCGTGATGCACGGCGGGCGCGTCACGCACTGGCAAGGCACCGCGGTGGCATAG
PROTEIN sequence
Length: 229
MSSSLHLESVRLAYDTPRGPHTVVDDFSLALAAGDIACLFGPSGCGKTTVLRAIAGFEPVRAGSIRLGDALLSSSQIHLPPEQRRVGMMFQEYALFPHLSAARNVAFGLRRLPRAAQRERVAEMLALVGLADAAERYPHELSGGQQQRIALARALAPSPALLLLDEPFSNLDGGTRERLTAQVRDILKQAGQTAILVTHNEAEAQAMADRIGVMHGGRVTHWQGTAVA*