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cn_combo_scaffold_658_15

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 14254..14964

Top 3 Functional Annotations

Value Algorithm Source
short-chain dehydrogenase n=1 Tax=Variovorax paradoxus RepID=UPI00036B5339 similarity UNIREF
DB: UNIREF100
  • Identity: 87.2
  • Coverage: 235.0
  • Bit_score: 403
  • Evalue 2.00e-109
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26841.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 234.0
  • Bit_score: 396
  • Evalue 2.00e-107
putative oxidoreductase, SDR family similarity KEGG
DB: KEGG
  • Identity: 85.1
  • Coverage: 235.0
  • Bit_score: 390
  • Evalue 3.80e-106

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGCAGATCAAGGATTCCGTCGTCTTCATCACCGGCGCCAACCGCGGCCTCGGCCTTGCGTTCGCAAAAGCGGCGCTGGCCGCGGGCGCGCGCAAGGTCTACGGCGCGGCGCGCGACCCGAAGACCGTCACGCTGCCGGGTGTGACACCCGTCGCGCTCGACGTGACGCAGCCCGCGCAGATCGAGGCGGCCGTGCGGGCATGCGGCGATGTTTCGGTGCTGGTCAACAACGCCGGCATCTCGCGCGGATCGAGCCTCCTGGGCTCGCCTGACGCGATGGCCGCTGCGCGCGCCGAATTCGAAACCAATTTCTTCGGCCCCTGGGCCGTGACGCAGGCCTTCGCCCCGGTGCTCGCGGCCAACGGCGGCGGCGCGGTGCTCAACGTGTTGTCGGCCCTGAGCTGGACCACCTTCCCGGGCGTGGCGACCTACAGCACGACCAAGTCGGCCGCATGGTCGCTGAGCAACGGGCTGCGCAACGAACTCGCGGGGCAGGGCACGCAGGTCACCAGCCTGCACGTGGCCTTCATGGACACCGACATGGCCGCGCATGTGCCCGGTGCCAAGGCTTCGCCCGACGACGTGGCGCGGCAGGCCCTGGAAGGCGTGGAGGCAGGCAGGCCCGAGGTGCTGGCCGACACAGTCACGCGCCAGCTCAAGCAGGGCCTGTCGAGCGACACGCCGCCCTATGCGACGGCGCCTGCCCGATAA
PROTEIN sequence
Length: 237
MQIKDSVVFITGANRGLGLAFAKAALAAGARKVYGAARDPKTVTLPGVTPVALDVTQPAQIEAAVRACGDVSVLVNNAGISRGSSLLGSPDAMAAARAEFETNFFGPWAVTQAFAPVLAANGGGAVLNVLSALSWTTFPGVATYSTTKSAAWSLSNGLRNELAGQGTQVTSLHVAFMDTDMAAHVPGAKASPDDVARQALEGVEAGRPEVLADTVTRQLKQGLSSDTPPYATAPAR*