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cn_combo_scaffold_658_16

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(14977..15291)

Top 3 Functional Annotations

Value Algorithm Source
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI0003680A3C similarity UNIREF
DB: UNIREF100
  • Identity: 78.3
  • Coverage: 106.0
  • Bit_score: 172
  • Evalue 2.60e-40
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 169
  • Evalue 4.60e-40
Putative signal peptide protein {ECO:0000313|EMBL:ACS20309.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 107.0
  • Bit_score: 169
  • Evalue 2.30e-39

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAAAAAGCTTACTTTGGCATTCGGCGCCGCGGCCTTGTTGTCGCTGGCCGCATTCACCGCACCGGCGCAGGCACAGCCCGGCGGCAGCTTCATTCAGGCACAGGTGTACGTCGTGCCGCCACCGCCGCCGCGCCGTCATTACTACGCGCCGCCTCCGCCGCGCTACTACCACGGCCCGCGCCACTACCACGGCGGCGACCGCTACTACCGCGACCGCCGCTGGGATGACCGCCGCCATGGTCGCCGTGACAACGACGGTGACGGCGTGCCCAACCGCTACGACCGCCGGCCGAACAACCCCTATCGCTACTGA
PROTEIN sequence
Length: 105
MKKLTLAFGAAALLSLAAFTAPAQAQPGGSFIQAQVYVVPPPPPRRHYYAPPPPRYYHGPRHYHGGDRYYRDRRWDDRRHGRRDNDGDGVPNRYDRRPNNPYRY*