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cn_combo_scaffold_658_22

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 20509..21891

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter substrate-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003648D92 similarity UNIREF
DB: UNIREF100
  • Identity: 94.6
  • Coverage: 460.0
  • Bit_score: 906
  • Evalue 1.10e-260
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJL79227.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonad similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 460.0
  • Bit_score: 902
  • Evalue 2.90e-259
putative ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 461.0
  • Bit_score: 889
  • Evalue 5.10e-256

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGAAACTCGTCAAATCGTTGATCGCGCCGACGCTGGTTGCGTTGGGCCTCATAGCGGCGGGCAATGCCGCCGCGCAGGAGAAACTCACCGTCTGGTGGGTCAAGGGCTTCTACAAGGCGGAGGACGACGCTCTGTTCGCCGCCATCAAGAAGTTCGAGGAGAAGAACAAGAACGTCAAGATCGAGCTGTCGCAGTACCCGGTGCAGGACATGATCCCCAAGACCGTGTCCGCGCTCGACTCCGGCAGCCCGCCCGACGTGGCGTACGCCGACGTGTACGACTTCCAGGTCACCGGCAAGTGGGCCTACGACGGCAAGCTCGAGGACATCGGCAGCGTGCTCACGCCCATGAAGGACCGTTTCGCGCCCAACACGCTGGAGACCACGTACCTCTACAACGACCAGACCAAGGCCAAGGCGTACTACGCGTTCCCGATCAAGCAGCAGACGATGCACATCGAGTACTGGCGCGACATGCTGGCGGAGGCGGGCTTCAAGGAGTCGGACATTCCCACCGGCTGGAAGGACTACTGGTCGTTCTGGTGCGACAAGGTGCAGCCCGCCAGCCGCAAGGAAAGCGGCAAGCGCACCTTCGGCATCGGCCAGCCGATGGGCGTGGATTCGAGCGACGCCTTCTATTCGTTCCTGACCTTCATGGACGCCTACAACGTCAAGCTGGTGGACGACAACGGCAAGCTGCTGGTCGACGACCCGAAGGTGCGCACCGGCCTCATCGGCGCCATGACCGACTACACCGCGCCCTACACCAAGGGCTGCACGCCGCCTTCTTCCACCAGCTGGAAGGACCCGGACAACAACGTCGCGTTCCACAACAAGACGACCGTGATGACGCACAACGCGACCATCTCCATCGCCGCCAAGTGGCTCGACGACTCGACCAACGCGTCGCTCACGCCGGAGCAGCGCGAGGAAGCGCGCAAGAACTACACCGAGCGCATCCGCACCGCGGGCTTCCCCAACAAGCCTGACGGCAGCAAGATGGTCTACCGCACGGCCGTGAAGACCGGCGTGGTGTTCAAGGACGCGAAGAACAAGGCGCGTGCCAAGGAGTTCGTGGCCTTCCTGCTGCAGGAAGAAAACCTCACGCCGTACGTCGAAGGATCGCTGGGCCGCTGGTTCCCGGTGACCAAGGCCGCGCAGCAGCGCGACTTCTGGAAGGCCGACCCGCATCGCCTGTCGGTCTACAACCAGTACGCAGCGGGCACCGTGACCTTCGAGTTCACCAAGAACTACCGCTTCACCGTGCTGAACAACGAGAACGTGTGGGCCAAGGCCATGAGCCGCATCGTCACCGACAAGGTGCCGGTGGACAAGGCGGTCGACGAAATGATCGCGCGCATCAAGACGGTGGCGGCGCAGTAA
PROTEIN sequence
Length: 461
MKLVKSLIAPTLVALGLIAAGNAAAQEKLTVWWVKGFYKAEDDALFAAIKKFEEKNKNVKIELSQYPVQDMIPKTVSALDSGSPPDVAYADVYDFQVTGKWAYDGKLEDIGSVLTPMKDRFAPNTLETTYLYNDQTKAKAYYAFPIKQQTMHIEYWRDMLAEAGFKESDIPTGWKDYWSFWCDKVQPASRKESGKRTFGIGQPMGVDSSDAFYSFLTFMDAYNVKLVDDNGKLLVDDPKVRTGLIGAMTDYTAPYTKGCTPPSSTSWKDPDNNVAFHNKTTVMTHNATISIAAKWLDDSTNASLTPEQREEARKNYTERIRTAGFPNKPDGSKMVYRTAVKTGVVFKDAKNKARAKEFVAFLLQEENLTPYVEGSLGRWFPVTKAAQQRDFWKADPHRLSVYNQYAAGTVTFEFTKNYRFTVLNNENVWAKAMSRIVTDKVPVDKAVDEMIARIKTVAAQ*