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cn_combo_scaffold_658_23

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21929..22819

Top 3 Functional Annotations

Value Algorithm Source
Permease component of ABC-type sugar transporter n=1 Tax=Variovorax sp. CF313 RepID=J2L1V9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.2
  • Coverage: 296.0
  • Bit_score: 554
  • Evalue 5.20e-155
Permease component of ABC-type sugar transporter {ECO:0000313|EMBL:EJL79228.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 296.0
  • Bit_score: 554
  • Evalue 7.30e-155
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 92.4
  • Coverage: 289.0
  • Bit_score: 548
  • Evalue 1.00e-153

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGAGCTCGACCGTCACCGCTTCCAACCCCGCCGCCGCGACCACCGCGGCACCTGTTGCCAACCCGGGTGCGCGTCATGCGCGCTGGCAGTTCTGGGGCGCGGTGATGGTCGTGCCCTACCTGCTGGTGTTCGTGGTGTTCGTGCTCTACCCGGTGGGGTACGGGCTCTGGCTCGCACGCCATCCGCAAAGCTACGTGAAGCTGGTCGAAGACCCGATCTTCTTTCGCTCCGTCATCAACACGGTCGTGTTCCTGATCGTGGCCATCAACGTCAAGATGCTGGTGGCGCTGGTGCTGTCGGGCTTCTTCGTCATCTCGCGCTGGTGGATCAAGATCGTTGCGGCGATCTTCATCCTGCCTTGGGCAATGCCGTCGATTCCCACCATCCTGTCGTTCCGCTTCATGCTCAACCCCGAGTGGGGCGTGATCAACACCACCATCTTCCGCCTCACGGGCGCCGACGGCCCCAACTGGCTCAACGACCCGACGTTGGCGCTGGGCTTCGCGATGGTGGTCCATATCTGGAAGTCGCTGCCGTTCTGGACCCTGATCCTGGTGGCGGGGCGGCTGGCCATTCCCGGGGAGCAGTACGAGGCCGCGTCGGTCGACGGCGCTTCGTCGTGGCAGAAGTTCCGCTTCGTGAGCTGGCCCGCGCTCAAGACGCTCTACATCACCTCGCTCATCCTCTCGATGATCTGGACGCTGGGCGACTTCAACAGCGTCTACCTGCTCACCGGTGGCGGCCCCGCCGACCTGACGCACGTGCTGGCCACGCTGGGCATTCGCTACCTGCGTCTGGACCAGGTCGACCTGTCGATGGCATCCATCGTGGTGGCGCTGCCTTTGATACTGCCGCTCGTGTACTTCATGATGAAGAGGCTTTCGAAATGA
PROTEIN sequence
Length: 297
MSSTVTASNPAAATTAAPVANPGARHARWQFWGAVMVVPYLLVFVVFVLYPVGYGLWLARHPQSYVKLVEDPIFFRSVINTVVFLIVAINVKMLVALVLSGFFVISRWWIKIVAAIFILPWAMPSIPTILSFRFMLNPEWGVINTTIFRLTGADGPNWLNDPTLALGFAMVVHIWKSLPFWTLILVAGRLAIPGEQYEAASVDGASSWQKFRFVSWPALKTLYITSLILSMIWTLGDFNSVYLLTGGGPADLTHVLATLGIRYLRLDQVDLSMASIVVALPLILPLVYFMMKRLSK*