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cn_combo_scaffold_658_24

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 22816..23667

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V876_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 283.0
  • Bit_score: 545
  • Evalue 3.90e-152
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 95.4
  • Coverage: 283.0
  • Bit_score: 545
  • Evalue 1.10e-152
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ADU38428.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 283.0
  • Bit_score: 545
  • Evalue 5.50e-152

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAAACGCTGGACCCCGAAAGCCATAGCGACCGAGGCCAAGCTGCTGCTCATCGGTATCCCGGTGCTGCTGTGGACGCTGATCCCGGTCTATCACATGGCGTTGTTCGCCTTCTCGACCAAGGACTCGGCCACTTCCGGCCACCTGTGGCCGACCACGCCGACGCTGGCGAACTTCAACACGGTGTTCCACCAGAAGCACTTCTACCTGGACCACTTCTGGCTGCAGCTGTGGAACTCGCTGGTGATCGCGTTGTCGGTCGGCGCGATCACGCTGTTCGTGGCCACCACCGCCGCTTTCGCCATCAGCAGGCTCAGGGTGCGCGGCGGTCGCACGGTGATGAACCTGGCGCTGTTCACGTATTTCATTCCGGCGGCGTTCCTGGCCGTGCCCATGTACAAGACCATGGGCAACTACGGGCTGCTGAACAGCCAGTGGGCGCTCATCCTGGCGATGGTGACCATCGCGTCGCCGTACTGCATCTGGGTGCTCAAGCAGGCTTCGGACAAGCTGCCCTACGAGCTCGACGAAGCCGCGCGCATGGACGGCGCGTCGCCGCTGCAGCTGTTTCGCCTCGTGTACCTGCCGCTGATGGTGCCGTCGCTGGTGGCGGTGGGCACGTATTCGCTGCTGCTGGCGTGGAACGAGTACCTCTATGCGTTCCTGCTGCTGTCCAACGACAAGAGCGTGACGCTGGCGGTGGCGCTCGGCAACTTCCTATCGGCCGACGACTCGCCGTGGGAACTGCTCATGGCCACCGGCCTCATCTATGCGCTGCCGCCCGCGGCGATCTACTACACCTTCAAGCGCTACATGGTGGGCGGCCTGACTGCCGGCGCCGTCAAGAGCTGA
PROTEIN sequence
Length: 284
MKRWTPKAIATEAKLLLIGIPVLLWTLIPVYHMALFAFSTKDSATSGHLWPTTPTLANFNTVFHQKHFYLDHFWLQLWNSLVIALSVGAITLFVATTAAFAISRLRVRGGRTVMNLALFTYFIPAAFLAVPMYKTMGNYGLLNSQWALILAMVTIASPYCIWVLKQASDKLPYELDEAARMDGASPLQLFRLVYLPLMVPSLVAVGTYSLLLAWNEYLYAFLLLSNDKSVTLAVALGNFLSADDSPWELLMATGLIYALPPAAIYYTFKRYMVGGLTAGAVKS*