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cn_combo_scaffold_658_26

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(24775..25872)

Top 3 Functional Annotations

Value Algorithm Source
endonuclease n=1 Tax=Variovorax paradoxus RepID=UPI000365BBD0 similarity UNIREF
DB: UNIREF100
  • Identity: 93.6
  • Coverage: 346.0
  • Bit_score: 660
  • Evalue 1.10e-186
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26848.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona similarity UNIPROT
DB: UniProtKB
  • Identity: 93.9
  • Coverage: 346.0
  • Bit_score: 665
  • Evalue 6.10e-188
endonuclease/exonuclease/phosphatase similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 346.0
  • Bit_score: 659
  • Evalue 6.80e-187

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1098
GTGCCCTTTTTCGTTGCCGGCATGGCGCTGCCCGGCTCGGGCCACAATTGTTGCGCCATGCAATACATCCCGCCCAACTACGCCACGCTCTTCGTCGCCACCTGCAACCTCCTGAACCTCGCGAACCCGAACCGCGCGTACTACGAGAACCAGGACGCCTACACCGAGCGCGAGTACGAACGCAAGATCGACTGGACCGGCGAGCGCTTCCATGCACTCAATGCCGACGTGCTGGCGGTGCAGGAAGTGTGGGACGAAGCGGCGCTGAAAGCCGCCATCGCGCGCAGCGGCCTGCGCTACGACTTCGTCTCGGCGCCCGGAGCCGAGAACACGCCGCCGCCCGGCAGCCCCGCCGGCACGCCGGCCAGGCCGGGCGCGCAAGGCACGCCGCGCGTGGGCATCGCGACGCGGCTCAAGGTGGACGAGCTCCGCTCCTTCGTCGACTTCCCGCCGGGCTTCGGCGTCGAGGTGCCGGGCCTGGGCGCGCACACCCGCTTCGAACGCCCGCCCCTCTTGGCCACGGTGCGCATGAAGCACGGCCAGCAGGTGCATGTGCTCACGGCGCACCTGAAGTCCAAGCGGCCGAAGTTCCTGCAGGATGCGCAGGGCAACCATCTGGAGGACCGCGACGACCGCAAGGTCGGCGCGATGGCCTCCCTGCGCTCGCTGCTGATGCGCGGCGCGGAAGCCGCGGCCCTGCGCTGCATCGTCATCGACCTGCTGCAGGGCACCAACATGCCGCTGGTGGTGATGGGCGACTTCAACGACAACCCGCACAGCGTGACCACGCAACTGGTGGCCGCCACCTCCGACGTGGCCTACGACAAGGCCGCGCGCGACGTGGCGCTGTTCAACGCCTACGAGATGCAGGGCGAGTCGGCGCTCAAGAAGGACGTGGCCTACTCGCACATCCACCAGGGCTTTCCGGAAGTGCTCGACCAGATCCTGGTGAGCGAGGAGTTCGTGGCCGGCAGCCGCCACAGCCTGGGCGACGTGCGACGCGTCGACTACTTCAACGACCACCTGCACGAAGGGCGCGACCGCTCGCGCTCCGACCACGGTTTCGTGCGCGCCCTGCTGCGGCTGCGCACGAGCTGA
PROTEIN sequence
Length: 366
VPFFVAGMALPGSGHNCCAMQYIPPNYATLFVATCNLLNLANPNRAYYENQDAYTEREYERKIDWTGERFHALNADVLAVQEVWDEAALKAAIARSGLRYDFVSAPGAENTPPPGSPAGTPARPGAQGTPRVGIATRLKVDELRSFVDFPPGFGVEVPGLGAHTRFERPPLLATVRMKHGQQVHVLTAHLKSKRPKFLQDAQGNHLEDRDDRKVGAMASLRSLLMRGAEAAALRCIVIDLLQGTNMPLVVMGDFNDNPHSVTTQLVAATSDVAYDKAARDVALFNAYEMQGESALKKDVAYSHIHQGFPEVLDQILVSEEFVAGSRHSLGDVRRVDYFNDHLHEGRDRSRSDHGFVRALLRLRTS*