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cn_combo_scaffold_658_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(25933..27738)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent RNA helicase RhlE {ECO:0000256|HAMAP-Rule:MF_00968}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00968};; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 607.0
  • Bit_score: 1087
  • Evalue 0.0
ATP-dependent RNA helicase RhlE n=1 Tax=Variovorax sp. CF313 RepID=J2TKY2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.7
  • Coverage: 607.0
  • Bit_score: 1087
  • Evalue 0.0
DEAD/DEAH box helicase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 94.7
  • Coverage: 607.0
  • Bit_score: 1076
  • Evalue 0.0

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1806
ATGAATTTTGATGAACTGAAGCTGGCTCCCGCCATCTTGAAGGCTGTGCACGAGCACGGTTACGACACCCCGACCCCCATCCAGGCGCAAGCCATCCCCGCCGTCCTCGACGGCCACGACCTGCTCGGCGGCGCCCAGACCGGCACCGGCAAGACCGCGGCCTTTACGCTGCCCATGCTGCACAAGCTCAGCATGAGCCGCAGCGCCACCAACAAGTTCGGCGGCACCGGCATCCGCGCCCTCGTGCTGACCCCCACCCGCGAACTCGCGGCCCAGGTCGAAGAGTCGGTGCGCACCTACGGCAAGTACCTGCAGCTCGACTCGACCGTGATCTTCGGCGGCGTCGGCATGAACCCGCAGATCAGCAAGCTCAAGAAGGGCGTCGACATCCTCGTGGCCACCCCGGGCCGCCTGCTCGACCTGCAGCAGCAAGGCATGCTCGACCTGAGCCAGGTCCAGATGCTGATCCTGGACGAAGCCGACCGCATGCTCGACATGGGCTTCATCCACGACGTGAAGAAGATCCTGGCGCTGGTGCCCAAGGAAAAGCAGAGCCTGCTGTTCTCGGCCACCTTCAGCGACGACATCCGCGACCTGGCCTCCACGCTACTGAAGAACCCGCAGAGCATCCAGGTCACGCCGCGCAACACCACGGTGCAGCGCATCACCCAGGTGATCCACCCCGTGGGCCGCGGCAAGAAGAAGGCGCTGCTCGCGCACATCATCAACGAGAACAAGTGGAGCCAGGTGCTCGTGTTCACGCGCACCAAGTTCGGCGCCAACAGCGTGGCCGAATTCCTCACCAAGAACGGCATCGAGGCGATGGCGCTGCACGGCAACAAGAGCCAGAGCGCCCGCACGCAGGCGCTGGCCGGCTTCAAGAGCGGCGATATCCGCGCACTGGTGGCCACCGACATCGCGGCCCGCGGCATCGACATCGACGAGCTGCCGCACGTCGTGAACTACGAAATTCCGAACGTCAGCGAAGACTACGTGCACCGCATCGGCCGTACCGGCCGCGCCGGCTCGAGCGGCGAGGCCGTGAGCTTCGTGTGCCTGGACGAAGAAGGCTTCATGCAGGAAATCGAGCGCTTCACCAAGCAGACGATTCCCGTGCAGATCGTCGAGGGCTTCGGTCCTGAAGAAGGCGAACGCGCCGAACCCATCGCCATGGGTCGCCAGACGATCTGGGGCGGCGCCGGCCGTCCGCCGAGCCGCGACGTGATGCAGGCTGCCGCCAAGGCCGCCCGCACCGAGATGCTGCAACGCATCCGCGAGAACAAGGCCGGCCAGGGTGGCGGCAACGGCGGTGGCGGCGGCAATGGAGGCGGTCAGCGCCGCGGCGGTGGCCAGGGCGGCGGTCAAGGCCGCGGCGCCAATGGCGGCGGCCAGGGCCAGGGTCAAGGCCCGCGCGGTCCTGGCGGCGGTGGTGCTCGCGCACCGCAAGGCCGCGGCCCGCAGGGTCCGGCACGCGCGCCGCACCATGCACCGCACCAGCAAGCCCATCAGCCGCATGACGAGCGCCAGCCGCGCCATCACGGCAACAGCCACAGTCCCACGCAAGCCAACCAGGTCGCGCACCTGCGTGCCGAAGCAGTCGGCGGCGGCGCGGGCCAGCCGGATCCGTTGCGCACCAGCGTCGACCACATGGGTGGCGGCCGCGGGCGTGGACGTCCGGGCGGCGGTGGCGGCGGCTACGGCGGCGGCAACCGTTCGGGCGGCGGTGGCCGCTCGGGTGGTGGCGGCGGCTACGGCGGTGGTGGTGGCCGCTCCGGCGGCGGCGGTGGCCGTTCGTTCGGTCGCTGA
PROTEIN sequence
Length: 602
MNFDELKLAPAILKAVHEHGYDTPTPIQAQAIPAVLDGHDLLGGAQTGTGKTAAFTLPMLHKLSMSRSATNKFGGTGIRALVLTPTRELAAQVEESVRTYGKYLQLDSTVIFGGVGMNPQISKLKKGVDILVATPGRLLDLQQQGMLDLSQVQMLILDEADRMLDMGFIHDVKKILALVPKEKQSLLFSATFSDDIRDLASTLLKNPQSIQVTPRNTTVQRITQVIHPVGRGKKKALLAHIINENKWSQVLVFTRTKFGANSVAEFLTKNGIEAMALHGNKSQSARTQALAGFKSGDIRALVATDIAARGIDIDELPHVVNYEIPNVSEDYVHRIGRTGRAGSSGEAVSFVCLDEEGFMQEIERFTKQTIPVQIVEGFGPEEGERAEPIAMGRQTIWGGAGRPPSRDVMQAAAKAARTEMLQRIRENKAGQGGGNGGGGGNGGGQRRGGGQGGGQGRGANGGGQGQGQGPRGPGGGGARAPQGRGPQGPARAPHHAPHQQAHQPHDERQPRHHGNSHSPTQANQVAHLRAEAVGGGAGQPDPLRTSVDHMGGGRGRGRPGGGGGGYGGGNRSGGGGRSGGGGGYGGGGGRSGGGGGRSFGR*