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cn_combo_scaffold_674_3

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 850..2061

Top 3 Functional Annotations

Value Algorithm Source
membrane protein n=1 Tax=Variovorax paradoxus RepID=UPI0003785212 similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 403.0
  • Bit_score: 745
  • Evalue 2.20e-212
UPF0761 membrane protein RT97_10040 {ECO:0000256|HAMAP-Rule:MF_00672}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 94.8
  • Coverage: 403.0
  • Bit_score: 752
  • Evalue 4.20e-214
ribonuclease bn similarity KEGG
DB: KEGG
  • Identity: 94.0
  • Coverage: 403.0
  • Bit_score: 745
  • Evalue 1.00e-212
  • rbh

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1212
ATGATAGCCGCCATGAATCGACGGCAGCTTTGGAGGGATCTTTCGCGTTTTCCGTGGCGCAACACCGCCGCGGTACTGGGCGAGCGTTTCCGCGAAGACAAGCTCGGCCTCACGGCCAGCAGCCTGACCTTCACCACCACCATCGCGATGGTTCCCTTCTTCACGGTGGCGCTGGCGCTGTTCACCGTGTTCCCGATGTTCGCCAAGATGCAGGGCCGGCTGCAGCGCTGGCTGATCGAGAGCCTGATTCCCGACAACATCGCGCGCCAGGTGCTCGGCTACCTGAACCAGTTCGCGAGCAAGGCCAGCGGGCTGGGCATCGCGGGCCTGATCGTGCTGCTGATCACCGCCATCGCGCTGATCCTCACCATCGACAAGACGCTCAACAACATCTGGCGCGTGCGCTCGCCGCGCCCGTTCGCGCAGCGGGTGCTGATCTACTGGGCGACCATCACGCTGGGGCCGCTGATCCTGGCGGTGAGCCTGTCGACCACCTCCTATGTGTTCTCGGCCTCGCGCGACGTGGTGGGCGGCACCATGGTCAAGCTGGCCTTCGACAGCCTCGAATTCATGCTGCTCGCGGCCGGCATGGCCTCGCTCTACCACTACGTGCCCAACACCAACGTGCGCTGGGCGCATGCCTGGGCCGGCGGCATCTTCGTGGCGGCGGCCATCGAGATCGCCAAGCGCGTGCTGGCCTATTACCTGAGCCTGGTGCCGACCTATTCGGTGCTGTACGGCGCCTTCGCCACCTTCCCGATCCTGCTGGTGTGGATCTACGTGGCCTGGGTGATCGTGCTGCTGGGCGCGGTCATCGCGGCCTACCTGCCGAGCCTGCTGACGGGGGTGGCGCGGCGCGGCGGCACCGCCGGCTGGCCGCTGCAACTGGCGATGGAATCGCTGCAGCACCTGGCCCGCGCGCGCGCCACGCCGGCCAAGGGCATGGGCGCGGCCGAACTGGTGGCGCGCATGCGGGTCGATTCGCTGCAGCTCGCGCCGGTGCTCGAGACGCTGGTGGCGCTCGACTGGATCGCGCCGCTGGCGGAAGAGCCCGCCAACGAAGACCCGCGCTACGTGCTCCTTGCCGACCCCTCGACGCCCATCGAGCCGCTGCTGAAGGAGCTGCTGATGCCGCGGGCCGAGCCGCTCGAAGACCTCTGGCAGAAGGGGCCGCTGCGCTCCCTGAGGCTGGGCGACGTGCTCTTGATCTAG
PROTEIN sequence
Length: 404
MIAAMNRRQLWRDLSRFPWRNTAAVLGERFREDKLGLTASSLTFTTTIAMVPFFTVALALFTVFPMFAKMQGRLQRWLIESLIPDNIARQVLGYLNQFASKASGLGIAGLIVLLITAIALILTIDKTLNNIWRVRSPRPFAQRVLIYWATITLGPLILAVSLSTTSYVFSASRDVVGGTMVKLAFDSLEFMLLAAGMASLYHYVPNTNVRWAHAWAGGIFVAAAIEIAKRVLAYYLSLVPTYSVLYGAFATFPILLVWIYVAWVIVLLGAVIAAYLPSLLTGVARRGGTAGWPLQLAMESLQHLARARATPAKGMGAAELVARMRVDSLQLAPVLETLVALDWIAPLAEEPANEDPRYVLLADPSTPIEPLLKELLMPRAEPLEDLWQKGPLRSLRLGDVLLI*