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cn_combo_scaffold_890_12

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 8835..9296

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Variovorax paradoxus RepID=UPI0003824946 similarity UNIREF
DB: UNIREF100
  • Identity: 88.9
  • Coverage: 153.0
  • Bit_score: 265
  • Evalue 3.30e-68
Universal stress protein {ECO:0000256|PIRNR:PIRNR006276}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF3 similarity UNIPROT
DB: UniProtKB
  • Identity: 80.8
  • Coverage: 151.0
  • Bit_score: 238
  • Evalue 6.00e-60
putative universal stress protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 145.0
  • Bit_score: 192
  • Evalue 7.50e-47

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 462
ATGTCCGTCTACAAGCACGTGCTCGTCCCGCTGGACGGCAGCCCCACGGCCGACTGTGGTCTGCAGGAAGCCATCCGTCTCGCTGGCGAACTCGGAAGCAGGCTGCGTCTGCTCAACGTGGTCGACGACTTTCCGATGCTGGTGGAGATATCGAGCACCTCCAGTTTCGAGGCCGGCCTGCAGAAGGCGCGCGAGCATGGCGAATCGGTCCTCTCGCACGCCCTGGCCCGGGCGACGGCCGCGGGAGTCGAGGCCGAGACCGTGCTGCGCGAAGTCACGCAGGAGCGCGTCGCCGAAGTCGTGACCGATGAGGCCGCGAAAGCAGCCTGCGACCTAATCGTGATGGGCACCCATGGCCGCCGCGGCCTCAGCCGGCTGGCGCTCGGCAGCGACGCCGACCGTGTGGCGCGAAGCAGCCCCGTGCCGGTGCTGCTGGTGCGTGCGGCAGCGACACCCGCTTGA
PROTEIN sequence
Length: 154
MSVYKHVLVPLDGSPTADCGLQEAIRLAGELGSRLRLLNVVDDFPMLVEISSTSSFEAGLQKAREHGESVLSHALARATAAGVEAETVLREVTQERVAEVVTDEAAKAACDLIVMGTHGRRGLSRLALGSDADRVARSSPVPVLLVRAAATPA*