ggKbase home page

cn_combo_scaffold_890_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 12865..14364

Top 3 Functional Annotations

Value Algorithm Source
RND transporter n=1 Tax=Pseudomonas fluorescens RepID=UPI000375DF38 similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 488.0
  • Bit_score: 557
  • Evalue 1.80e-155
RND transporter {ECO:0000313|EMBL:EXF94477.1}; TaxID=1042209 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens H similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 488.0
  • Bit_score: 557
  • Evalue 2.50e-155
RND transporter similarity KEGG
DB: KEGG
  • Identity: 58.8
  • Coverage: 490.0
  • Bit_score: 554
  • Evalue 2.50e-155

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1500
ATGACAGGCACACCTGCTCCGGGCTGGAGGTGGCTGGCCGCGGTGCTTGCCCTGGCCGGCACGGGCCTGTCGGCGGGCTGCATGGTCGGCCCCGACTTCGTGCGCCCGGCGCCTGCGCAGGTGGACAGCTACACGCGCGGTGCCCTGCCTGCGACGACCGAAGCCGGCGACGGGCGATCGCAGCGCTTCGGCCCGGCAGCGGAGCTTCCCGCGGACTGGTGGCGTCTCTTCGGATCGCCCGCGCTGGACGAGGCCGTGCGGCAGGCGCTGCAGCACAACCCGACGCTTCAATCGGCCGAGGCCAGCCTTCGCCAGAGCCAGGACGAACTTCGCGCGGGCCACGGCATCTTCTACCCGCAGCTCGACGCCTCCTTCGGCGCCACCCGCGCCCGTACGGCACCGGTCCTGCAGGGCTCCTCCGCCGCCGGCACGATCTACCAGGTGGTCACGCTCAGCGGTGCCATCAGCTATCCGCTCGATGTCTTCGGCGGCGAACGCCGCACCGTCGAGGGCCTGGCCGCGCAGGCGGAGAACCAGCGTTTCGTGGCGATGGCAGCCTACCTGGCGCTGGAGGCGAATCTGGTCCAGACGTGCGTTGCACGCGCCGCCTACGTCGCGCAAAGGCGCACGACGGAAGAACTGATCGCCCTGGAGCGCGACCAGTTGCACAGCATCGAGGCCCAGGTGCATGCCGGCACCGTGCCCTATGCCAACCAGTTGAGCCAGCTGAGCCTGATCGCCTCCAACCGGGCGCAGCTCGCCGCGCTGGCGCAGAAGATCAGCCAGGCCGACCATCTGCTGGCCGCCCTGCAGGGCGACACGCCGGCCGAGGCTGCGCTCCCCGACGTCGACATCGGGGAGCTGACGCTGCCGAGGGACCTGCCGCTCAGCCTCCCGTCGGAACTGGTGCGGCAGCGCCCGGACATTCTCGCGGCCGAAGCGCAGCTGCATGCGGCCAGCGCGGCCATCGGCGTGGCAACCGCGGCCATGTTTCCGAGCTTCAGCCTGAGCGCCGGGTACGGTGCCGCCAGCCCGCAACTCGCCAGTCTGCTGGCCGGCGGCTCCCGCTACTGGAGCCTCGCGCCTGCCGTCGCGCTGCCACTCCTGCACGGCGGCACGCTGCGAGCCAGGCGCCAGGCCGCGATCGACGCCCACGCCGCCCGGGAAGCCGACTACCGTCAGACGGTGCTCTCCGCATTCGAGCAGGTTGCCGATGCGCTGCGGGCGCTCGAGCACGACGCGCAGGCACTTCAGGCGCAGGCCGAGGCGAGATCATCGGCCGCCGATGCGCTGGCCCTGCAGCAGGCCGGCTATCGCGCGGGACTCGTGGCCTATGTCGACCTGCAGAATGCGGACATCCAGTTCCACGCCGCAAGTCTTTCCTACCTTTCGGCATTGGCGCAGCGCCATCAGGACACCGTCGCCCTGTTCGCGGCGCTCGGCGGAGGCTGGTGGAATGCCCCGTCATCCGGTGCCGGCGCGCGCGCCGGGCAGCCATGA
PROTEIN sequence
Length: 500
MTGTPAPGWRWLAAVLALAGTGLSAGCMVGPDFVRPAPAQVDSYTRGALPATTEAGDGRSQRFGPAAELPADWWRLFGSPALDEAVRQALQHNPTLQSAEASLRQSQDELRAGHGIFYPQLDASFGATRARTAPVLQGSSAAGTIYQVVTLSGAISYPLDVFGGERRTVEGLAAQAENQRFVAMAAYLALEANLVQTCVARAAYVAQRRTTEELIALERDQLHSIEAQVHAGTVPYANQLSQLSLIASNRAQLAALAQKISQADHLLAALQGDTPAEAALPDVDIGELTLPRDLPLSLPSELVRQRPDILAAEAQLHAASAAIGVATAAMFPSFSLSAGYGAASPQLASLLAGGSRYWSLAPAVALPLLHGGTLRARRQAAIDAHAAREADYRQTVLSAFEQVADALRALEHDAQALQAQAEARSSAADALALQQAGYRAGLVAYVDLQNADIQFHAASLSYLSALAQRHQDTVALFAALGGGWWNAPSSGAGARAGQP*