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cn_combo_scaffold_890_26

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21186..21914

Top 3 Functional Annotations

Value Algorithm Source
chemotaxis protein CheY n=1 Tax=Variovorax paradoxus RepID=UPI0003677BE5 similarity UNIREF
DB: UNIREF100
  • Identity: 93.0
  • Coverage: 242.0
  • Bit_score: 447
  • Evalue 7.30e-123
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:EJL76421.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale similarity UNIPROT
DB: UniProtKB
  • Identity: 85.1
  • Coverage: 242.0
  • Bit_score: 408
  • Evalue 6.90e-111
two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 83.1
  • Coverage: 248.0
  • Bit_score: 402
  • Evalue 9.90e-110

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 729
ATGAAAACCACGCCCCACATCGTTGTTCTCGACGACGAGATCGATATTACGCAGCTGCTGGCCAACTATCTTCACGGCCACGGCTTCCGCGTCACCCAGGTGCACGACGGACGCGCGCTCATGGCGCTGATGGAAACCGACCCCGCCGATCTCGTGCTGCTCGACCTCGGCCTCCCTGGCGAAGACGGCTTCTCGATCGCGCGCCGCATGCGCGAACGCTGGCATTGCGGGCTCGTGATCGTCACGGGCCGGGGCGATGCAGTGGACAAGGTCGTGGGGCTGGAGGTAGGTGCGGACGACTACGTCACCAAGCCCTTCGATCTGCGCGAGCTGGTGGCTCGCGTGAAGGCCGTGTTGCGGCGGCTGGCTCCCGCCACGCCTGTGCCCCCGGCGTCGGCCGGGGCCTTCGCCGACAGGCTGCGCTTTGCCGGGTGGCAGCTCGATACCGCCGCGCGCAGCCTCCTGAACCCATCGGGCGAGCCGGTGACATTGACCGGCGGCGAATTCGACCTGCTGCAAGCCTTTGCGCGCCATCCCGGCCGCGTGCTTTCGCGCGACTTCCTGCTGGAGCAGACACGGGGGCGCGAGGCGGCCCCCTTCGACCGCACGATCGATGTGCAGGTGGGCCGGCTGCGCAAGAAGATCGAGGCGGACGCCGAAGATCCGCAGCTCATCAAGTCGGTGCGAGGCGCGGGCTACATCCTCGTTCCGCCTGTCTCCAATGGCTGA
PROTEIN sequence
Length: 243
MKTTPHIVVLDDEIDITQLLANYLHGHGFRVTQVHDGRALMALMETDPADLVLLDLGLPGEDGFSIARRMRERWHCGLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLRRLAPATPVPPASAGAFADRLRFAGWQLDTAARSLLNPSGEPVTLTGGEFDLLQAFARHPGRVLSRDFLLEQTRGREAAPFDRTIDVQVGRLRKKIEADAEDPQLIKSVRGAGYILVPPVSNG*