ggKbase home page

cn_combo_scaffold_890_27

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 21907..24024

Top 3 Functional Annotations

Value Algorithm Source
histidine kinase n=1 Tax=Variovorax paradoxus RepID=UPI000365C2C9 similarity UNIREF
DB: UNIREF100
  • Identity: 90.1
  • Coverage: 704.0
  • Bit_score: 1217
  • Evalue 0.0
PAS domain S-box {ECO:0000313|EMBL:EJL76422.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.7
  • Coverage: 705.0
  • Bit_score: 1159
  • Evalue 0.0
multi-sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 79.9
  • Coverage: 693.0
  • Bit_score: 1060
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2118
ATGGCTGACGCTGCCGGCGATCCGCTCCAGCTGCCCGGCGCGCCCGGCCAGGTACTGCCATCCGGCATCGACGAAGGCAGCGTCTTCCGCTCGCTCTTCGCCGCCTATCCCGATTCGCTGCTGGTGGTGGACCAGACCGGCCGCATCGTCCTGGCCAACCCCTCGGCGGCCACGCTGCTGGGCTATGCGCAGAACGAACTGGTCGGCCTGAACGTCGAGGCGCTGGTGCCGGACAGCATCCGTCCACGGCACGCCTCCTACCGCGAGGCCTATGGCCGTGCCCCGCGCCCTCGCCCCATGGGCACGCACATGGAGCTGGTCGCCAAGCGCAAGGACGGCAGCGAGGTCATGGTGGAGATCGCGCTGAGCCCGTTGCAGAACCACGGCCTGCCGTTCGTTGTCGCGGCCATCCGCGACATCGGGGCCTACCCTCGCGTAAAGCAGGCACTGCAACGCGCCCGATACAGCGAACATCTGGCCCAGTTGGGCCGCCTCGCGGTCGACACGCGCGACCTGCAGGCGGTGCTCGAACACGTGCCGGAGATCATCACCAAGGCCCTGGAAGTCGAAGTCGCGATGGTGTGGCTCCTCGACGCCAGCCGTGCCGAATTCCGCGTGGCCAGCGGCGTCGGCCTGGTCGCCGGCGAGGAGATCGGCGCGCGCATGGTCAACCGTCCGGACACGCCGCCGGGCTTCGTCCTCTCCCAGGGCCGGCCTGTCGTGGTGCAGGACTACGGCAAGGAGCTGCGGTTTTCAGTGCCGAAGGCTTATCTCGAGGCCGGGCTAGTGAGCGCCCTCGCGGTGCCGCTGTCCGACCGGGGCCGCGTAATCGGCATGCTCTCCGTTCGCTCCACGGAATCCAAGCGCTTCGGCGACGAGGAAGTGCGCTTTCTCGAGTCGCTGTCGAGCCTGCTCGCGACCAGCCTGCAGCGAACGCAGACGGAAGAAGCGCTCAACCATGCCCAGCGGCTCGAGAGCGTCGGCCAGCTCACCGGCGGCATTGCGCACGACTTCAACAACCTGCTCACGGTGATCCAGGGCAACCTCCAGGTCCTCGAAGAACTGCCGGCCCTCGCGCAGGACGGTTATGCCCAGCAACTGCTGGGGGCCGCCACACGCGCGTCGCGTCGCGGCGCGGAGCTCACGGGAAAGCTGCTGGCGTTCTCGCGCCGGCAGGTGCTGCAGCCGGTCGCCGTCGACACGCACGCGCTGCTGTACTCGCTGGCCGACATGCTGCGCCGGACCCTGGACCAGCGCATCGGCATCGAGATCGACACGGCCCCCGGTCGTCCGCTGGTGGTGGCGGACCCGGGACAGCTGGAATCCGCCTTGCTCAACATCGCGATCAATGCGCGCGATGCCATGCCCGAGGGCGGCACGCTCCACTTCCGCACGGCCATCTGCGGCGCGCTGCCAGCGATTCTGCGCAACCAGCGCAACGACCCGCAGGGCAGCGCCGCCGCGCACTTCGTCGCGATATCCATAGCCGACAGCGGCAGCGGCATGACCGATGACGTCAAGGAACGGGCGTTCGAGCCCTTCTTCACCACCAAGGAGGCCGGCCGTGGCACGGGGCTGGGACTCAGCACGGTATACGGCTTCGTCAATCAGTCCCGGGGCGCCGTCGCGATCGACAGCGAGATCGGGCAGGGAACCACGGTGACGCTCTACCTCCCGCAACAGGAGGAGGCCCGCGCGCCCGCCGCCGCGGAAGAACACGCGGGCGAAGCGCTTCCAGCCGGGCTGCGGGTGATGCTGGTCGAGGATGACGCGGAAGTCCGCAAGGTTGTCGAGAACTTCCTGTGCACGCTGGGCTGCGAAATCGTCATCGCGGCCTCTACCGCCGAGCAGGCCCTGGCCACCCTGGATACGGGCACCGAACCCTTCGACCTTCTGCTGAGCGACATCGCCCTGGGCGCCGGCATGCGCGGCACGCGGTTGGCCGCCGAGATCCGGCAGCGCTTTCCCCGCGTCGCGGTACTGCTGATGTCGGGCTTCTCGTCGGAACTCCTCGATGCCGACCGAGAGGTACCGCAAGGTTGGGAGCTGCTTCGCAAGCCTTACACGCGCTCCGAACTGGCCCGGGCCATGGCGAGGGTGCTGACCGGCAACGCCTGA
PROTEIN sequence
Length: 706
MADAAGDPLQLPGAPGQVLPSGIDEGSVFRSLFAAYPDSLLVVDQTGRIVLANPSAATLLGYAQNELVGLNVEALVPDSIRPRHASYREAYGRAPRPRPMGTHMELVAKRKDGSEVMVEIALSPLQNHGLPFVVAAIRDIGAYPRVKQALQRARYSEHLAQLGRLAVDTRDLQAVLEHVPEIITKALEVEVAMVWLLDASRAEFRVASGVGLVAGEEIGARMVNRPDTPPGFVLSQGRPVVVQDYGKELRFSVPKAYLEAGLVSALAVPLSDRGRVIGMLSVRSTESKRFGDEEVRFLESLSSLLATSLQRTQTEEALNHAQRLESVGQLTGGIAHDFNNLLTVIQGNLQVLEELPALAQDGYAQQLLGAATRASRRGAELTGKLLAFSRRQVLQPVAVDTHALLYSLADMLRRTLDQRIGIEIDTAPGRPLVVADPGQLESALLNIAINARDAMPEGGTLHFRTAICGALPAILRNQRNDPQGSAAAHFVAISIADSGSGMTDDVKERAFEPFFTTKEAGRGTGLGLSTVYGFVNQSRGAVAIDSEIGQGTTVTLYLPQQEEARAPAAAEEHAGEALPAGLRVMLVEDDAEVRKVVENFLCTLGCEIVIAASTAEQALATLDTGTEPFDLLLSDIALGAGMRGTRLAAEIRQRFPRVAVLLMSGFSSELLDADREVPQGWELLRKPYTRSELARAMARVLTGNA*