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cn_combo_scaffold_1828_4

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 4835..6019

Top 3 Functional Annotations

Value Algorithm Source
aminotransferase n=1 Tax=Variovorax paradoxus RepID=UPI000363DD78 similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 394.0
  • Bit_score: 779
  • Evalue 1.30e-222
Fatty-acid desaturase {ECO:0000313|EMBL:EJL80411.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Vari similarity UNIPROT
DB: UniProtKB
  • Identity: 90.9
  • Coverage: 394.0
  • Bit_score: 755
  • Evalue 4.90e-215
fatty acid desaturase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 80.1
  • Coverage: 392.0
  • Bit_score: 671
  • Evalue 1.40e-190

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1185
ATGCCATCCCTGCTTTATTCCGGCGTCCTGGATCTTCCGTGGTGGGGCGTGCTGCTGGCCGCGCTCGCGCTCACGCACGTCACCATCGCCTCGGTCACCATCTTCCTGCACCGCCACCAGGCGCACCGCGCGCTCGAGCTGCACCCCGCGGCGAGTCACTTCTTCCGCTTCTGGCTCTGGCTGACCACCGGCATGGTGACCCGGGAGTGGGCCGCGGTGCACCGCAAGCATCACGCGAAATGCGAAACCCCCGAAGACCCGCACAGCCCGCAGGTGCACGGGCTCAACCGGGTGCTGTGGGGCGGGGTGTTCTATTACATGCGCGAGGCGCGGCACGCCGAGACTCTGCAACGCTACGGCCACGGCACGCCCGACGACTGGCTGGAGCGGCATCTCTACTCGAAGCACAAGATCCTTGGCATCGTGCTGATGGGCGTCGTGGACATGGCGCTCTTCGGCGTCGTGCCGGGCGCGCTGGTGCTGCTCACGCAGATCGCGTGGATCCCGTTCTGGGCGGCCGGCGTGGTAAACGGCATCGGCCACTACTGGGGCTACCGCAACTGGCCGGCCGGCGACGCCAGCACGAACATCTTTCCGGTCGGCATCCTGATCGGCGGGGAGGAACTGCACAACAACCACCATGCCTTTCCGGCCTCGGCGAAGCTTTCGAGCAAGTGGTTCGAGTTCGACATCGGCTGGCTCTACATCCGCACGCTGCAGGCGCTGGGCCTGGCCCGCGTGAAGCACGTGGCGCCCACGCCGCGCCTGGTCGCGCCCAAGGCGAACGTCGACCTGGCCACGGTACAGGCGATCATCCGCTGCCACTACGACGTGCTGTCGAACTACACGCGCTCCCTGAAGACGGCCTGCGTGGCCGAACTCGGCCGCCTGCGCGGCATCTCCCCGGAGGCCGCGCGCGCGCTGAAGGCCGTCAAGCCGTGGCTGGGCAAGGACCAGGGCCTCCTCGGGCCGTCGCGGCACCGGCAGGTGATGCAGGCGTTGAAGGCCTCGCAGGCGCTGGCTACGATGTATTCGATGCGCGGCGAGCTGACCGCCCTGTGGAGCCGCTCCACCGCCACGGGCGAGCAGCTTGCCAGGCAGTTGCAGGACTGGTGCCAGCGCGCGGAGGCGAGCGGCATCGCGCCACTGGCGGATTTTTCGCGCCGGCTGCGTTCATACGCCTGA
PROTEIN sequence
Length: 395
MPSLLYSGVLDLPWWGVLLAALALTHVTIASVTIFLHRHQAHRALELHPAASHFFRFWLWLTTGMVTREWAAVHRKHHAKCETPEDPHSPQVHGLNRVLWGGVFYYMREARHAETLQRYGHGTPDDWLERHLYSKHKILGIVLMGVVDMALFGVVPGALVLLTQIAWIPFWAAGVVNGIGHYWGYRNWPAGDASTNIFPVGILIGGEELHNNHHAFPASAKLSSKWFEFDIGWLYIRTLQALGLARVKHVAPTPRLVAPKANVDLATVQAIIRCHYDVLSNYTRSLKTACVAELGRLRGISPEAARALKAVKPWLGKDQGLLGPSRHRQVMQALKASQALATMYSMRGELTALWSRSTATGEQLARQLQDWCQRAEASGIAPLADFSRRLRSYA*