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cn_combo_scaffold_1828_5

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 6055..6444

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000363078E similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 124.0
  • Bit_score: 203
  • Evalue 1.30e-49
Surface antigen {ECO:0000313|EMBL:EJL80410.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax similarity UNIPROT
DB: UniProtKB
  • Identity: 70.1
  • Coverage: 127.0
  • Bit_score: 186
  • Evalue 3.00e-44
17 kDa surface antigen-like protein similarity KEGG
DB: KEGG
  • Identity: 47.3
  • Coverage: 112.0
  • Bit_score: 113
  • Evalue 4.90e-23

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 390
ATGAAGCCTGTCCCGGCACTTTCCGTTTCCATCATGGCCGCCGCCCTCGTGGCAGCCTGCGGCGGCTTTCCGGCCGCCGTGCCGGGCGGCGCGATGCTCACCGGCTCGCTCGCGGCTTCCGCGCCCGGCAGCTTGGCCGCCAGGGTGATGGACGACAGCGACCGCCGCTGTGCGGCGAGCGCGCTGGAGACCCTTTCGAACGGCGAGTCTTCGGCCTGGCTCAATCACGATACCGGCGACAGCTTTGTCTTCACGCCCACGCGCGGCTTCGATCAGCGCGGCGTCCGCTGCCGCGAATTCCGGCTCGAAGTGACCGTGGGCGGCCGCCCCGACGGCATCGGCGGCAGCGCATGCCGCCAGCCCGACGGCTCATGGCGCGTTTCCGCCTGA
PROTEIN sequence
Length: 130
MKPVPALSVSIMAAALVAACGGFPAAVPGGAMLTGSLAASAPGSLAARVMDDSDRRCAASALETLSNGESSAWLNHDTGDSFVFTPTRGFDQRGVRCREFRLEVTVGGRPDGIGGSACRQPDGSWRVSA*