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cn_combo_scaffold_1828_19

Organism: CN-SCN_Variovorax_85x

near complete RP 50 / 55 MC: 2 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(19756..20262)

Top 3 Functional Annotations

Value Algorithm Source
universal stress protein UspA n=1 Tax=Variovorax paradoxus RepID=UPI00036FA73D similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 168.0
  • Bit_score: 304
  • Evalue 5.30e-80
Universal stress protein UspA-like protein {ECO:0000313|EMBL:EJL80398.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Va similarity UNIPROT
DB: UniProtKB
  • Identity: 82.1
  • Coverage: 168.0
  • Bit_score: 275
  • Evalue 4.80e-71
universal stress protein, UspA family similarity KEGG
DB: KEGG
  • Identity: 70.4
  • Coverage: 169.0
  • Bit_score: 232
  • Evalue 9.40e-59

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGTACCAGCGAATTCTTGTTCCCATCGACGGCAGTTCCACCTCCAGCCGCGGACTGGCGGAGGCCATCCAGCTGGCCAAGCTCACGGGAGGGCGCCTGCGCCTGGTGCATGTCATCGACGAGCTTTCGTTCGCCCTGACCATGGACGCCTATGCGGGTTATGCCGGCAACTGGTCGGAAGAGCTTCACGGCAATGCGAAGAAGCTGCTCGACGACGCCCAGGGCCGGGCGATCCGGGAAGGCGTCGAAGTCGACGCGGTGCTGCTCGACAGCTTCAAGCGCAGCGTGCACGACCAGGTCATATCCCACGCGCAAGCCTGGAAGGCCGACCTGATCGTGATCGGCACCCATGGTCGCCGCGGAATCGGCCGCTGGGTGATGGGCAGCAGCGCGGAGCACATCCTGCGCATGTCGCCCGTCCCGGTGCTGCTGATTCGCGCACCCGAGAGCGCGAAGGCCGAGCACGAGCGCTTCACGCTGCCCAGTGGAGAACTGGCCAGCCAGTGA
PROTEIN sequence
Length: 169
MYQRILVPIDGSSTSSRGLAEAIQLAKLTGGRLRLVHVIDELSFALTMDAYAGYAGNWSEELHGNAKKLLDDAQGRAIREGVEVDAVLLDSFKRSVHDQVISHAQAWKADLIVIGTHGRRGIGRWVMGSSAEHILRMSPVPVLLIRAPESAKAEHERFTLPSGELASQ*